Virgibacillus halodenitrificans: BME96_10535
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Entry
BME96_10535 CDS
T04548
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vhl
Virgibacillus halodenitrificans
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vhl03016
]
BME96_10535
Enzymes [BR:
vhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BME96_10535
Transfer RNA biogenesis [BR:
vhl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BME96_10535
Prokaryotic type
BME96_10535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF4955
Motif
Other DBs
NCBI-ProteinID:
APC48589
UniProt:
A0AAC9J0Q7
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All DBs
Position
complement(2031590..2032480)
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AA seq
296 aa
AA seq
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MNGILPLWKPKGLTSHDCVVKIRKLFKTKKVGHTGTLDPEVEGVLPICIGEATKIVPFLT
DTKKTYVADISLGMSTDTEDSHGYPLEKVVVNQIPSDEEINLVLQGFEGCITQVPPMYSA
VKVNGKKLYEYAREGIEVERPSRKVYIYGIQYLGSNPESKTFKIEVECSKGTYIRTLSVD
IGRKLGFPAHMADLTRLRTGAFSKKNSVTFAMIEKAVDDQTHHTLLKPIICGIQHLDVMN
VDEETKNKVKNGQKLPFEQSMKTDPFAVLFEEELLAIYQKHPEKPDQLKPVRVFQG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattttgccattatggaaaccaaaaggtctaacttctcatgattgtgttgtt
aaaataaggaagttatttaagacaaaaaaggttggacatacaggtacacttgatccagaa
gtagaaggagtattacctatttgtataggtgaagccacaaaaattgttccatttttgacc
gacacgaaaaaaacgtatgttgcagatattagtcttggtatgtctacagatacagaggac
tcacatgggtatccactagagaaagtggtggtcaatcaaataccttcagatgaagagata
aatcttgtactacaaggttttgaagggtgcataacccaagtgccaccaatgtattctgca
gtgaaagtaaatggaaaaaaattatatgaatatgctcgagagggcattgaagttgaacgt
cccagtagaaaagtatatatatatggaatacaatacttaggttcaaatccagaaagcaaa
acatttaaaatagaagtggaatgttcaaagggcacatatatacgtacactaagtgtggat
ataggaaggaaattaggattccctgcgcacatggctgacttaaccagactgagaactgga
gctttttcaaagaaaaatagtgtaacttttgctatgatagaaaaggcggtagacgatcaa
acacaccatacgttactaaaaccgattatatgtggtatacagcatctcgatgtgatgaat
gtggacgaggaaacaaaaaacaaggtaaaaaatggacaaaagcttccatttgagcaaagc
atgaagacagatcctttcgctgttctttttgaagaggaattattagctatttatcaaaaa
catccagagaaacctgatcaacttaaaccagtacgggtttttcaaggataa
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