Virgibacillus halodenitrificans: BME96_11020
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Entry
BME96_11020 CDS
T04548
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BME96_11020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_11020
Enzymes [BR:
vhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BME96_11020
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BME96_11020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
AAA_30
Zn_ribbon_6
ATPase_2
AAA_19
Flavi_DEAD
SLFN-g3_helicase
Cas3-like_C_2
ADDB_N
T2SSE
IBR_1
TrwB_AAD_bind
nSTAND_NTPase5
UBC_like
Motif
Other DBs
NCBI-ProteinID:
APC48683
UniProt:
A0AAC9NL70
LinkDB
All DBs
Position
complement(2120754..2123162)
Genome browser
AA seq
802 aa
AA seq
DB search
MNIAKVIVDVPSKAINQTFDYLIPEKYMEILQIGMRVTVPFGPRKVMGFVVGKTNDSELD
KLKEINGVLDITPVLTEELLKLGKWVAKDSVSFYITALQAMLPQVLKAQYKKELIRTTGE
RLPEPLEFLFAGRDAIPYEEFEYSTISYYQLQKTIQEGGVSVNYLVKSKITKKQVSMIKP
AKDITHLEEILVDMSKNAKKQRQLLMHFIENPEPIERQGLLKKIGTTASTLKPLLDKSLL
EAYTVEVYRNPYNENDFKPTTALTLTKEQQKAITPINKSIEEELHEVFLLHGVTGSGKTE
IYLQAIEKVINKGEEAIVLVPEIALTPQMVRRFKGRFGTNVAVMHSALSKGEKYDEWRKI
QRKEVQVVVGARSAIFAPFENIGIIIIDEEHETTYKQEDQPKYHARDVAIRRAETHKCPV
VLGSATPTLESFARAKKEVYKLLTLSKRTNEQGMPQVEIVDMRKELHAGNRTMFSRQLKE
KMEDRLQKGEQIVLLLNRRGYSTFVMCRDCGHVKECPHCDIALTYHKNTNHLKCHYCSYE
EPMPIVCPECESDLIRYFGTGTQRVEEALTQLLPEASIIRMDVDTTRRKGAHEKLLGQFA
RQEANILLGTQMIAKGLDFENVTLVGVLTADSMLHLPDFRSSEKTFQLLTQVSGRAGRHS
LEGEVIVQTYTPDHYSIELASQYDFQTFYENEMRMRKTFQYPPYYYLALVTVSHQNKVKT
AQTTQNIVQLLQKVVNDNTVILGPTPSPIPRMKDRYRYQCMIKYKNEPKLRFYLNKILEQ
FYDEMRKEDLFISIDMQPYHLM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatagctaaagtgattgtcgatgtaccatcaaaagcaataaaccaaacctttgat
tatcttataccagaaaaatatatggagatacttcaaataggcatgcgtgttacggtgcct
tttggaccaagaaaagtgatgggttttgtagtcggtaaaacgaatgattctgagcttgac
aaactaaaagaaataaatggagttttggatatcacccctgttttaacagaagagctatta
aagcttggaaaatgggttgctaaggacagtgtcagtttttatattactgctttacaagcg
atgctgcctcaagtattaaaagcccagtacaaaaaagaattaatccgaacaacaggagag
aggttgccagaaccattagagtttctatttgcaggcagagatgcaattccgtatgaagaa
tttgaatactctacaattagttattatcaattacaaaagacgattcaagaaggcggggta
tccgtaaattatcttgttaagtcaaaaatcacaaagaaacaagtaagcatgataaaacct
gcaaaagatattactcatctggaagaaattcttgttgatatgtctaaaaatgcaaaaaaa
caacgtcagctattaatgcattttattgaaaatccagaaccgatcgagagacaggggctt
ttaaaaaagattggaactacagcttcaaccttaaaacctttgttggataaatcgctactg
gaagcatacaccgtagaagtgtatagaaacccgtataatgaaaatgattttaagcccaca
actgctttgacattaacaaaagaacaacaaaaagcaatcacccctattaataaaagtatt
gaagaagaattacacgaagtatttttattacatggagtaacaggaagtgggaaaacagaa
atttaccttcaggcaatcgaaaaggtaattaacaaaggtgaggaagcaatcgtcttagtt
ccagaaatagcgcttacccctcaaatggtgaggcgttttaaaggaagatttggtacaaat
gttgctgttatgcatagtgcattatccaagggtgagaaatacgatgaatggagaaagatt
cagagaaaagaagttcaagtagtagttggcgccaggtccgcaatatttgctccttttgaa
aacatcggcattattatcattgatgaggaacatgaaacaacatataaacaagaggaccag
cccaaataccatgcaagagatgtagcgatccgacgtgccgaaacacataagtgtcctgtg
gtactgggcagcgctacccctactcttgaatcgtttgcaagggctaaaaaagaagtgtat
aaacttcttacacttagcaagcggacaaatgaacaaggcatgccacaagttgaaattgta
gacatgagaaaagaacttcatgcaggcaatcggacgatgttctcaagacaattaaaagag
aagatggaagatcggcttcaaaagggagaacagattgtattgttattaaaccgaagaggt
tattctacttttgtaatgtgtcgtgattgtggccatgtgaaggaatgtccacattgtgac
attgcgttaacctatcacaaaaatactaaccatttaaagtgccactattgctcttatgaa
gagcctatgcctattgtctgtcctgaatgtgaaagtgatttaatccgttattttggtaca
gggacacagcgtgtagaagaagccttaactcagcttttacctgaagcaagcatcatacgg
atggatgtggatacaacgagacgaaagggagcccatgaaaaactgctcggccagtttgca
aggcaagaggcgaacatattattaggaacccaaatgatagcaaaggggttggattttgaa
aatgttaccctcgttggggttctaaccgcagattccatgttacatttacctgattttcgt
tcatccgaaaaaacctttcaactgcttacacaagtaagtggtagagctggaaggcattcc
ttagaaggtgaagtaattgtacagacatatactccggaccattatagtattgagttggca
agccaatatgatttccagacattttatgaaaatgaaatgaggatgcgaaaaacctttcag
tatccaccttattattatttggcattagtaacagtatctcaccaaaataaggttaaaaca
gcacaaacaactcaaaatattgttcagttattacagaaagttgttaacgataatacagtg
attttaggaccaacgccatcccctattcctcgtatgaaagatagatatcgttatcagtgc
atgataaaatataaaaatgaaccgaaactacgtttttacttaaataaaattctggaacaa
ttctatgatgaaatgcgaaaagaggatctttttatttctattgacatgcaaccatatcat
ttaatgtaa
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