Virgibacillus halodenitrificans: BME96_11200
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Entry
BME96_11200 CDS
T04548
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl00470
D-Amino acid metabolism
vhl00550
Peptidoglycan biosynthesis
vhl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BME96_11200 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BME96_11200 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vhl01011
]
BME96_11200 (murD)
Enzymes [BR:
vhl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BME96_11200 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vhl01011
]
Precursor biosynthesis
Amino acid ligase
BME96_11200 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Mur_ligase
W02B3_4_N
Motif
Other DBs
NCBI-ProteinID:
APC48717
UniProt:
A0AAC9J1A8
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Position
complement(2160427..2161776)
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AA seq
449 aa
AA seq
DB search
MKTLEAFPYSNILVLGLAKSGTAAAKVLLKNNKYVRINDGKAIQSNDQIEELKEMGAEVI
IGSHPFSVLDDIQIVVKNPGIPYDNPIVAEAEKRNIPVITEIEIAGLLTKGPIIGITGSN
GKTTTTTLITEMLKCSQKPVKVAGNIGKVATDIAQTTDEDETMVIELSSFQLQGIKNFKP
NIAVLLNIYEAHLDYHKTFENYKAAKFNIFKSQTKNDYLVYNADDPTIIEAIHNADSIKI
PFSRKKQLNEGVWIDEQYVYFKNERVMSRKDIVLVGEHNLENILAAIAAAKLNGATNSGI
YQVLTTFQGVKHRLQFVDTINNRTFYNDSKATNILATQKALGAFKNSIILLAGGLDRGNE
FHDLLPFLKKVKGMVVFGQTADKLAGIAKEAQIPIVVKTENVQMAVKEAYEISAPADTIL
LSPACASWDQYKTFEERGDMFIQAVHTLR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttagaagcatttccttactcaaatattcttgtactgggattggccaaaagt
ggaacggctgctgccaaagtattattgaaaaataataagtatgtccgaattaatgatgga
aaggcaatacaaagtaatgatcaaatagaagaattaaaagagatgggtgccgaagtaatt
attggttcccatccgttctctgtattggatgacatacaaattgttgtgaagaatcctggg
ataccatatgataatccaatcgtggctgaagctgaaaaaagaaatattcctgttattact
gaaatagaaatagcaggattgctaacaaaagggcctataattggaataactggttcgaat
ggaaaaactactacaaccactttaataacggaaatgctcaagtgtagtcaaaaaccggta
aaggttgctggtaatattggcaaagtagcaactgatatagcgcaaacaaccgacgaagat
gaaactatggtgattgagctttcttcctttcaattacaaggtataaagaacttcaaaccg
aatattgcagtattattaaatatttatgaagctcaccttgattaccataaaacatttgag
aactataaagcagcaaagtttaacatatttaaatcacaaactaagaatgattatctggtt
tataatgcggatgatcccactattattgaagcaattcataatgccgattctataaaaatt
cccttctccaggaagaagcaactaaatgaaggtgtctggatagatgaacagtatgtgtac
tttaagaatgagcgagtaatgagtagaaaggatattgttttggttggtgagcataacttg
gaaaatatcctggctgcaattgctgcagctaaattaaatggggcgacaaatagtggaata
tatcaagtacttactacttttcaaggagtaaaacatcgtttacaatttgtagatacgata
aataatagaacattctataatgattcaaaagctaccaatattttagccactcaaaaagcg
ctcggtgcttttaaaaactctattattttactagcaggtgggttagatcgaggcaatgag
tttcatgatcttttaccattcctaaaaaaagtgaagggtatggttgtgtttgggcaaacg
gctgacaaattggctggaattgctaaagaggctcaaataccaattgtagtaaaaacggaa
aacgtacaaatggctgtaaaagaagcttatgaaatttccgcgcctgcagatactatttta
ttatctcctgcgtgtgcaagttgggatcagtacaaaacctttgaagaaagaggagacatg
tttatacaagccgtgcatacattaagatag
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