Virgibacillus halodenitrificans: BME96_11505 Help Entry BME96_11505       CDS       T04548                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism vhl  Virgibacillus halodenitrificans Pathway vhl03018   RNA degradation Brite KEGG Orthology (KO) [BR:vhl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     BME96_11505  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vhl03019]     BME96_11505 Messenger RNA biogenesis [BR:vhl03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      BME96_11505 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453 Motif Other DBs NCBI-ProteinID:  APC48775 UniProt:  A0AAC9NLA4 LinkDB All DBs Position 2222128..2223795 Genome browser AA seq 555 aa AA seqDB search MKFVKNDQAAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL VQNQDKIKGLFVTHGHEDHIGGIPYLLREINVPIYAGKLALGLIRNKLEEHGLLRNAKLN PLKEDDIIKFRKTSVSFFRTTHSIPDSFGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK MAEIGKEGVLCLLSDSTNSEVPGFTMSERVVGDSINDIFSRVDGRLIFATFASNIYRLQQ VVEAAVKHNRKVAVFGRSMESAINLGQELGYIQAPKDTFIEANQINRFPAQEVTILCTGS QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVGRTINKLYRAGADVIHGKL SNIHTSGHGSQEEQKLMLRLIKPKYFLPIHGEYRMLKEHIKLAAACDVDPSQSFVMDNGD VLALGKDSAAIAGKIPSGSVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI ASGPDIISRGFVYMRESEDLINEAQKLVAKHLNKVMERKTTQWSEIKNEITDTIAPFLYE RTKRRPMVLPIIMEV NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgaagtttgtaaaaaatgaccaagcagcagtttttgcactaggtggtctcggggaaatt ggtaaaaatacgtatggtgtccaattccaggatgagattattcttattgatgccggcatc aaatttcccgaagatgaactattgggaattgattacgtcatccctgattatacctatttg gtgcaaaaccaagataaaataaaaggattgttcgtaacgcacggacacgaagaccatatt ggggggattccatatcttctccgtgaaattaatgtgcctatatatgccggtaaactcgcg ctcggcttaatacgtaataaacttgaggaacatggtttattacgaaatgcaaaattaaac ccattaaaagaagacgatattattaaattccgaaaaacatccgttagtttcttcaggaca acacatagtattcctgattcatttggtattgtagttaaaacccctcctggtaacatcgta cacactggtgacttcaaattcgacttcacccctgtaggagagccagcaaatcttaccaaa atggcagaaataggcaaagaaggcgtactttgcttactttcagatagtaccaacagtgaa gtaccgggctttaccatgtccgaacgagttgttggcgatagtataaatgatatattcagt agagtagatggaagattgatatttgctacctttgcctctaatatatatcggttacaacaa gtagtagaagctgctgtcaaacataatcgaaaagtagctgtctttggccgtagcatggaa tcagcaatcaatcttggacaagaattaggttatattcaggctcctaaagatacgttcatt gaagcaaatcaaattaatcgttttccagcccaggaagtaacaattttatgtactggttct caaggtgaaccaatggctgccctttctcgaattgcgaatgggacgcatcgacaaattcag attatacctggagacactgttgtattttcctcatcaccaatccctggaaatacagtaagt gttggcagaacaattaataaattgtatcgtgcaggagcagatgttattcatggcaagcta agcaacattcatacatctggtcatggaagccaagaagaacaaaagctaatgctcagacta attaaaccgaaatatttcttaccaattcacggggaatacagaatgctcaaggaacatatt aaacttgccgctgcttgtgatgtagacccttcacagtcctttgttatggacaatggggat gttctagcacttggtaaggatagtgcagctattgcaggtaagatcccttctggttccgtg tatgtagatggaagcggaattggcgatataggaaatatcgtattacgagatcgaagaatt ctttctgaagaaggtctggtaattgtagttgtaagtattaatatgaaagaatttaaaatt gcatcaggtcctgatattatctctcgcggcttcgtatatatgcgagaatctgaggattta attaatgaagcacagaaacttgttgctaaacatttgaataaagtgatggaaagaaaaacg acccaatggtcagagatcaaaaatgagattactgatacaatcgctccattcttatatgaa agaacaaaacgtcgaccaatggtattaccaattattatggaagtataa

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