Virgibacillus halodenitrificans: BME96_13235
Help
Entry
BME96_13235 CDS
T04548
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
vhl
Virgibacillus halodenitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
PAS_9
AAA_5
AAA
AAA_2
Mg_chelatase
PAS_4
PAS_8
MCM
AAA_3
AAA_16
SpoVT_C
DUF4931_C
HTH_50
Motif
Other DBs
NCBI-ProteinID:
APC49100
UniProt:
A0AAC9J3K5
LinkDB
All DBs
Position
complement(2569648..2571012)
Genome browser
AA seq
454 aa
AA seq
DB search
MLHFNSKYKDEIFETVLENAYHCFVIVDAKGLITYMNKTYCDFIEVNRDEIIGKHVEEVI
ENTRMHIVARTGIEEIADLQYIRGNHMIANRIPVYANGEIVGAVGTVLFRDTKEWMKMNS
HIKDLMLEVEHYRSQLNDRYGVTYSLHDIVGSSPQLSKIKNQVKKVAPGDVTILLRGESG
TGKELFAHSIHHLSERNQKPFIKVNCAAIPEHLLESELFGYTEGAFTGAKKGGKLGKFQL
ADGGTIFLDEIGDMPLNAQVKILRVLQEGEVEAIGSVQTQKIDVRVVAATNQPLEKLIQE
GRFREDLFFRINVIQLHIPSLKDRADDIRVLAKYILTKVTNRSGKRVLYFDPQVLEFLTN
YSWPGNIRELENVIESAVHLSTSETITMEDLPDHFKKDIALGIPTGSLKETLNQAEKQAL
TTALHQSNGDKIEAAKRLKIGKSSFYDKLKKYNL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctacactttaacagtaaatataaggatgagatttttgaaacagttttagaaaatgct
taccattgttttgtaattgtcgatgctaaaggacttattacatatatgaataaaacgtat
tgtgattttattgaggtaaaccgagatgagattattggcaaacatgtggaagaagtcatc
gagaacacgcgtatgcacattgtggcaagaaccgggattgaggaaatagcagatcttcaa
tatatacgcggaaatcacatgatagcaaacagaattcctgtttatgctaatggagaaatt
gttggggctgttggaacggtcctttttcgtgatacaaaagaatggatgaagatgaatagc
catattaaggaccttatgcttgaagtggaacattatagaagtcaattaaatgatagatat
ggagttacctattcattgcatgatattgtagggagttctccacaattaagtaaaattaaa
aatcaggttaaaaaggtggctccgggtgatgttactattttactgaggggagaaagtgga
acaggtaaggaattatttgctcacagtattcaccatttgagtgagcggaatcagaaacct
tttattaaagtcaattgtgctgccattcccgagcatttactggaatcagagttgtttggt
tatacagaaggtgctttcacaggtgcgaaaaaaggcggcaaattgggtaaatttcaactt
gctgatggaggcacgatcttcttagatgaaattggagatatgccattgaatgctcaagtg
aaaattttacgtgtattgcaagagggagaagtagaggcgattggctcagtacaaacacaa
aagattgatgtgcgagttgtagctgcaacaaatcaaccattggaaaaattaattcaagaa
ggacgtttccgtgaagatttgttttttcgaattaatgtaatacagctccatattccctca
ttaaaggatcgtgcagatgatatacgggttttggcaaaatatattttaactaaagtgaca
aatcgttctggaaagcgagtgctgtattttgacccacaggtgctcgaatttctcactaat
tattcttggcctggtaatattcgtgaattggaaaatgtaattgagtcagctgtacatttg
tcaacgagtgaaacaattacgatggaagatttacctgatcattttaaaaaagatatagcg
ttaggaatcccaacaggaagcttgaaggaaacattgaatcaagcagaaaaacaagcatta
acaacagcattacatcaatcaaatggtgataaaatagaagctgcaaaacgtttaaagata
ggtaagtctagtttttatgataaacttaaaaaatataacttataa
DBGET
integrated database retrieval system
