Virgibacillus halodenitrificans: BME96_13280
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Entry
BME96_13280 CDS
T04548
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
vhl
Virgibacillus halodenitrificans
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vhl03019
]
BME96_13280
Messenger RNA biogenesis [BR:
vhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BME96_13280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_18
AAA_22
Rad17
AAA_16
nSTAND3
AAA_28
CoaE
Motif
Other DBs
NCBI-ProteinID:
APC49107
UniProt:
A0AAC9J200
LinkDB
All DBs
Position
complement(2577808..2578692)
Genome browser
AA seq
294 aa
AA seq
DB search
MRNGEQETKLVIITGMSGAGKTVAVQSFEDLGYYCVDNLPPTLLPKFLELMKDSTNNIRK
VALVMDLRGREFFDSLFEALDGLAKEDWLEEQILFLDAKNEKLVSRYKETRRAHPLAVEG
LPLNGIKQERKMLDELRGRAQRIIDTTNLKPKELREIILENYTEEKQETFSVHCVSFGFK
YGLPIDADLVFDVRFLPNPHYVEQMRPLTGLDKDVSSYVFKWSDTQKFKEKVLDLLQFML
PQYKKEGKSQLVVAIGCTGGQHRSVALTEFFAKELSSNYITHVSHRDIDKRKGR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacggagaacaagaaactaaattagttattattactggaatgtccggtgcggga
aagacagttgctgttcaaagttttgaggatttgggttattattgcgtggacaatttgcct
ccaacgcttttacctaaatttttggagttaatgaaggactcaactaataatataagaaaa
gttgctctggtaatggatttacggggccgtgagttttttgactctctctttgaagcattg
gatggccttgcgaaggaagattggttagaggagcaaattctatttcttgatgcaaaaaat
gagaaactggtaagtagatacaaggaaacacgaagggctcaccctttggcagtagaaggc
cttcctttaaatggaattaaacaggaacggaaaatgcttgatgagctaagagggagagca
caacgtattatagatacaacaaatttgaagccaaaagaattaagagaaataattttagaa
aattatacggaggaaaagcaagaaaccttctcagtccattgcgtttcatttggttttaaa
tatggattgcctattgatgctgatttagtttttgatgttcgattcctcccgaacccacat
tatgttgagcaaatgcgaccactaactgggttggataaagatgtatcatcttatgtattt
aaatggtcggatacacagaaattcaaagagaaggttttagatctgttacaattcatgctc
ccacaatataaaaaagagggtaaatcccaactagttgtagcaataggatgtactggtgga
caacatcgttcagtagcgcttactgagttttttgccaaagagctctcatcaaattatatt
acgcatgtcagtcaccgtgacattgacaaaagaaagggacgttaa
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