Virgibacillus halodenitrificans: BME96_14290
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Entry
BME96_14290 CDS
T04548
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vhl
Virgibacillus halodenitrificans
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_14290
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BME96_14290
Archaeal homologous recombinant proteins
BME96_14290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_16
ABC_tran
AAA_21
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
APC49291
LinkDB
All DBs
Position
complement(2808495..2811587)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPLKLKMTAFGPYKRTEIVDFNELEDNRLFVISGNTGAGKTTIFDAICFALYGSASGQD
RENTLMLRSDFAEDDTHTAVELLFELKGHHYRVLRQLGHIKRGNKSKTGDRFEFYEQVEG
REIPCVDRQIVSEIDKKIEMLIGLTQDQFKQIVMLPQGEFRKLLTSQTENKEEILRRLFK
TQTYQHINERLRIRKSKVEEAYNKAVQTRDTYIQHISATLPFREDAQLYQVLSEEHFNEN
QVVSGLEKEIEFYEERIKQDEETYEQAYKLHAQKQVEFSRAEAINKQWEEISDKEAQLKE
LQEKAPQYKEKENKLQQAERATQIYPYEKQRVDLKKDYQQKEQTLLQVQKEKQVAAKTVD
ESLASFQKEEKKQEEREALRKKLDQLYEFLPIVEEIDKTKQLLQQQKQDGKQIEQRLKEL
TATLKNYKNRRDSYKNEIKVLDQSPNELVKKNNQRNEMLNQYKLVEEFIDTKNKQVKLEK
EVQQKQANYKLIKEKYENIENTWLNGQASILASHLHEGGACPVCGSEHHPNKAVGEEASV
TKEELEKARKELEKTDDIYRNSVADWKAVKAQYEKRAVELSEINIPVNEAEEAKATILQE
GRQLKKDITNLEAATEKVTQLKKELEETEQHIEQVTVQEEKLEKQYQELNEKYNTTYAVY
QERIGKIPEQIRQLFELKQAITETTKKKEEMEEEWEKVQRELQKSKEEQTKVNTDLIHAT
NQLEETKRKQLDAEREWNNALDQAGFMNTKAYEEAKMSDIAREEAKQEIEEYNQKRVTLQ
FRVDELKTALNDKKQLDLSLLETQLQELKNAYETALKAVQQSREWFKEAQQLKDNILKAN
EQVRKIDQQLRTVSDLFNIVRGQNDRKISFERYLQIEYLEQIIDVANHRLRRLSNGQFQL
IRSDRQESHGRQSGLALDVHDAYTGQTRDVKTLSGGEKFNASLCLALGMSDVIQSFQGNI
QIDTMFIDEGFGTLDEESLNKAIDTLVDLQQSGRMIGVISHVQELKAIFPAILEVKKTKE
GSSETAFVLK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaaaactaaagatgacggcatttggtccatataagagaacggagattgtt
gattttaacgaattagaagataaccgtctttttgttatttccgggaatactggagcagga
aagacaacaatttttgatgcaatttgttttgctttatatggaagtgcaagtggacaagac
cgggaaaatacattgatgttgcgtagtgattttgcagaggatgatacacacactgcggtt
gaactactatttgaattaaagggtcatcattatcgagtgctccgtcagcttggtcatatt
aaaagaggaaataaatccaagacaggagatcgatttgaattttatgaacaagtggaagga
cgagagatcccgtgtgtagacagacaaattgtctcagaaatagataagaagatagagatg
ttaattgggctcactcaggatcagttcaagcaaatagttatgcttccgcaaggggagttt
cgaaagctattgacgtcgcaaactgaaaataaggaagagattttaagaagactttttaaa
acacaaacatatcaacatatcaatgaacgtttacgtatacgaaaaagcaaggtggaggaa
gcatataataaagcagtgcaaaccagggatacatatattcagcatattagtgctacgctc
ccttttcgagaagatgcacaactgtatcaggtgttgagtgaagagcattttaatgagaat
caagttgtatcaggtttagagaaagaaattgagttttatgaggaacggattaaacaagat
gaggaaacatatgaacaagcgtacaagctacatgcacaaaaacaagtagaattttcccgc
gcggaggcaattaataagcagtgggaagagatttcagataaagaagcacagctgaaagaa
ttgcaggaaaaagctcctcaatataaagaaaaagaaaataaacttcaacaagctgaacgg
gctacacaaatttacccatatgagaagcagcgtgttgatttaaagaaagattatcaacag
aaagaacaaacactgctacaagttcaaaaagaaaaacaagttgctgctaaaacagtagat
gaatctcttgcttcttttcaaaaggaagaaaagaagcaagaggaacgggaggcgcttcgt
aaaaaacttgatcagttatatgagtttttgccaattgtagaagaaatagataaaacaaag
caattattacagcaacaaaaacaagatggaaaacagatagaacaaagacttaaagaattg
actgctacacttaagaattacaaaaatagacgtgattcttacaaaaatgagataaaggtg
ttagatcaatccccaaacgagttagtaaaaaagaacaatcaacgcaatgaaatgttgaat
caatataaattagttgaagagtttattgatacgaaaaataaacaggttaaattggaaaag
gaagttcaacaaaagcaagctaattataagttaataaaggaaaaatatgagaacatagaa
aatacgtggttgaacggtcaagcaagcatacttgcaagccatctccatgaaggtggagcc
tgtcccgtttgcggaagtgagcaccatccaaacaaagcagttggtgaggaagctagtgta
acgaaagaggaattagagaaggctcgcaaggaactagaaaaaacagatgatatttaccgc
aatagtgttgcagattggaaagcggtgaaagcacagtatgaaaagagagctgtagaatta
tctgagattaacatcccagtaaatgaggctgaagaagcaaaggctactattttgcaggaa
ggccgacaactcaaaaaagatattacaaatttggaagctgcgacagaaaaagttacacaa
ctcaaaaaagagttggaagaaacggagcagcatattgaacaggtaactgtacaggaagaa
aaactggagaaacaataccaagaattaaatgagaagtataatactacttatgcagtttat
caggagcgcattggtaaaattcctgaacaaattcggcagctttttgaactaaaacaagct
attaccgagaccactaaaaagaaagaggaaatggaagaagagtgggaaaaggttcagcga
gagcttcagaagtcaaaagaagagcagacaaaggtaaacacggatttaattcatgctaca
aatcaacttgaagagacaaaaagaaaacagctagacgctgaacgtgaatggaacaatgcg
cttgaccaagcaggttttatgaacacaaaagcgtatgaagaggcgaagatgtcggatatt
gctcgtgaagaagcaaagcaagagatcgaagaatacaatcagaaacgagtaaccctacaa
tttcgggtagatgaattaaaaacggcattaaatgacaaaaaacaattggatctttctttg
ctggaaactcaacttcaggaacttaagaatgcttatgaaacagcacttaaagcagtacaa
caatcaagagaatggtttaaggaagctcaacagcttaaagataatatattaaaagcaaat
gagcaggttcgcaaaatagatcaacaactgcgcacagtttctgacttgtttaatattgtg
cgtggacaaaatgatcgtaagatatcgtttgagcgatacttgcaaattgagtaccttgaa
caaattatagatgttgcgaatcatcgtttgcggagattatccaatggacaatttcaactt
attcgaagtgatcggcaggaatcgcacggaaggcaaagcggattagctcttgatgtgcat
gatgcctacaccggccaaacaagagatgtaaagactttatccgggggagaaaagttcaat
gcttccctatgtcttgcgttgggaatgtcagatgtaattcagagttttcaaggaaatatt
cagattgacacgatgtttattgatgaaggatttggcacattggatgaggaatcacttaat
aaggcaatagatacgttagttgatttacaacaatcaggtagaatgatcggagttatttct
catgtccaagaacttaaagctattttccctgcaatattagaagtgaaaaaaacaaaggaa
ggctcaagtgaaacggcttttgttttaaaataa
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