Virgibacillus halodenitrificans: BME96_14295
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Entry
BME96_14295 CDS
T04548
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vhl
Virgibacillus halodenitrificans
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_14295
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BME96_14295
Archaeal homologous recombinant proteins
BME96_14295
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Transposase_24
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
APC49292
UniProt:
A0AAC9J1B9
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Position
complement(2811610..2812794)
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AA seq
394 aa
AA seq
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MKFFHTADWHLGKLVQGIYMTEDQDYILQQFIKAMEEEKPDAVIIAGDLYDRAVPPTEAV
HLLDEVLDTIVLKLKTPILAIAGNHDSPSRLNFGSKIMRDNGCHIVGNFTSEPKPVVLHD
EHGEVHFHLIPYCDPSVVRNAFQDDNIRTHNDAMEKITQQVTSTMNMEARHVFVGHAFIT
PYGEEEENTSDSERPLSIGGSEYVDAKHFTDFHYTALGHLHQAHFVSNETIRYAGSPLKY
SISEENHKKGFHIVEMNGNGEVEVEKRLLSPRRDMRTIEGTLEELLLLPVSDDYVFVRLM
DETPVLSPMEKIRSVYPNAMHVERKNYLLSPAEELNENTERTQMSDLELFRAFYKEVKGT
EVGEETEAIFKEVLDELLKEENETTAEIKEYITK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttttcacactgcagattggcatttgggtaagctagttcaaggtatttatatg
acagaggatcaagactatattttgcaacaatttattaaggcgatggaagaagaaaagccg
gatgcagtcattattgcaggagatctatatgatagagctgtccctccaacagaggcagta
catctcttggatgaagtgctagatacaattgttttaaagttaaagacaccgattttagcg
attgctggaaaccatgatagtcccagtcgattaaattttggcagtaagattatgcgagac
aacggctgtcatattgttgggaatttcacaagcgaacctaagcccgttgtattacacgac
gagcatggcgaagtgcattttcatttaattccatattgtgatcccagtgtagtgaggaat
gcgtttcaagatgacaacatacgcacccataatgatgcaatggagaaaattacacagcaa
gttacctctacaatgaatatggaagcacgtcatgtttttgtaggtcatgcatttattact
ccatatggagaagaagaagaaaacacaagtgattcagaacggccattgtctattggtggc
tctgagtatgttgacgccaagcattttacagattttcattacactgcacttggccatttg
caccaggcgcatttcgtatcaaatgaaacaattcgatatgctgggtcacctctaaaatat
tctatttctgaggaaaatcataaaaaaggctttcatattgtggagatgaatggaaatggt
gaggttgaagtagaaaaacgcctgctttcacctagaagggatatgcgcacgatagaagga
acgttagaagagctgcttttgctgccagtcagtgatgattatgtgtttgttcggctcatg
gatgagactcctgtgctttcaccaatggaaaaaatccgttcggtgtatccaaatgcgatg
catgttgaacgtaaaaactatttgctttccccggctgaagaactgaatgaaaatacagaa
cggacgcaaatgagtgacttggagctattcagagcattttacaaagaagtaaaagggaca
gaagttggggaagagacagaagcaatttttaaagaagttcttgatgagctgttaaaagaa
gaaaatgaaacaacagctgaaataaaagaatatattaccaagtaa
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