Virgibacillus halodenitrificans: BME96_16830
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Entry
BME96_16830 CDS
T04548
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl00260
Glycine, serine and threonine metabolism
vhl00460
Cyanoamino acid metabolism
vhl00630
Glyoxylate and dicarboxylate metabolism
vhl00670
One carbon pool by folate
vhl00680
Methane metabolism
vhl01100
Metabolic pathways
vhl01110
Biosynthesis of secondary metabolites
vhl01120
Microbial metabolism in diverse environments
vhl01200
Carbon metabolism
vhl01230
Biosynthesis of amino acids
vhl01240
Biosynthesis of cofactors
vhl04981
Folate transport and metabolism
Module
vhl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BME96_16830
09102 Energy metabolism
00680 Methane metabolism
BME96_16830
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BME96_16830
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BME96_16830
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BME96_16830
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BME96_16830
Enzymes [BR:
vhl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BME96_16830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
Harpin
mCpol
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
APC49752
UniProt:
A0AAC9J375
LinkDB
All DBs
Position
complement(3428168..3429403)
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AA seq
411 aa
AA seq
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MEHVKQADNELYEAIQAEKKRQQDKIELIASENFVSEAVMEAMGSVLTNKYAEGYPGKRY
YGGCEHVDVVEDLARDRAKQLFGADHANVQPHSGAQANMAVYFTVLEPGDTVLGMNLNHG
GHLTHGSPVNFSGTLYNFVDYGVDKETEQLDYDVVLEKAKEVQPKLIVAGASAYSRIIDF
AKFREIADAVGAYLLVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGMIFCKE
EYAKKIDKSVFPGMQGGPLMHIIAAKATSFKEALSDEFKTYSQQIIQNAQKLGEALNEEG
IRIVSGGTDNHLLLLDVTTLGLTGKVAEKVLDDIGITTNKNTIPFDTESPFVTSGVRIGT
AAVTTRGFGVEEMKEIAAIISLTLKNHEDESKLKEAADRVQQLTTKLPIYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgttaaacaagcagataatgaattatatgaagcaattcaggctgaaaaaaag
cgtcagcaggataagattgaattaatcgcttccgaaaactttgtttctgaggcagtgatg
gaagcaatgggatctgtcttaacgaataaatatgcggaaggttatcctggtaaaagatac
tatggaggctgtgagcatgtggatgtcgtggaagaccttgcccgtgaccgcgcgaagcaa
ctgttcggtgctgaccacgcaaatgttcagccacattccggtgcacaggcaaacatggca
gtatactttactgttttagagcctggtgacactgtgcttggtatgaacttgaaccatggt
ggccatttaacacatggaagccccgtcaatttcagtgggacattgtataatttcgttgat
tatggtgtggataaagaaacagaacagcttgattatgacgttgttttagagaaggcaaaa
gaagttcagccgaaattaattgtggctggtgctagtgcatattcccgtattattgatttt
gccaagttccgcgaaattgctgatgcggttggtgcttatttacttgttgatatggcacat
attgctggtctagtagccgcaggtcttcatccaaatccagtaccatatgctgactttgtt
acaacaacaacacataaaacacttcgcggtccccgtggaggaatgatcttctgtaaagaa
gaatatgcaaaaaaaattgataagtctgttttccctggcatgcagggtggcccattgatg
catatcattgcagccaaagcaacctcttttaaagaagcattatctgatgagtttaaaaca
tattctcagcaaattatccaaaatgcacaaaagctgggagaagcgttgaatgaagaaggg
attcgtatcgtttccggtggcacggataaccatctgttacttttagatgtgactacactt
ggacttacagggaaagttgcagaaaaagtgttagatgatatcggaataactacaaataaa
aacacgattccgtttgatacagaaagcccatttgtaacaagtggtgtgcggattggtacg
gcagctgttactacccgtggttttggagttgaggaaatgaaggaaattgctgcaattatt
tcacttactttaaaaaatcatgaagatgaatcaaaattaaaagaagctgcagatcgagtt
caacagttaacgactaaattaccaatttatgcataa
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