Virgibacillus halodenitrificans: BME96_16935
Help
Entry
BME96_16935 CDS
T04548
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BME96_16935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vhl03021
]
BME96_16935
03400 DNA repair and recombination proteins [BR:
vhl03400
]
BME96_16935
Transcription machinery [BR:
vhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BME96_16935
DNA repair and recombination proteins [BR:
vhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BME96_16935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
Ferritin-like
BUD22
Drc1-Sld2
Motif
Other DBs
NCBI-ProteinID:
APC49772
UniProt:
A0AAC9J274
LinkDB
All DBs
Position
complement(3449580..3450092)
Genome browser
AA seq
170 aa
AA seq
DB search
MSLSNYSHEDLKTMSMIELANLILLDEKKALDFRDVFEKIAEIKEFTEQDKENNIAQFYT
DLNVDGRFITIGSNLWGLKRWYPVEQADEEVTAAPKKKKKAKKKKKADEDADITEKELDI
VDEDIEELADDFNDDEDDEFDEDLEEEFDEELDDFEDDEDEDDEDEEEKK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttatcgaattacagccacgaagatcttaaaacaatgtccatgattgaattagca
aatttaatcttattggatgaaaaaaaggcgcttgattttagagatgtattcgaaaaaatt
gcagaaataaaagaatttactgagcaggataaagaaaataatattgcccaattttataca
gatttaaatgtggatggccgttttattaccattggttctaatctatggggattaaaacgt
tggtatccagttgagcaagctgacgaagaagtaactgcagcacctaaaaagaaaaagaag
gcaaagaaaaagaaaaaagcagatgaagatgctgatattacagaaaaagaactggatatt
gtcgacgaggatattgaagagcttgcagatgacttcaatgatgacgaagatgatgagttt
gatgaagacttagaagaagagtttgatgaggaacttgatgattttgaagacgacgaagat
gaagatgacgaagacgaagaagaaaagaaatag
DBGET
integrated database retrieval system
