KEGG   Vibrio harveyi: AL538_01410
Entry
AL538_01410       CDS       T04380                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vhr  Vibrio harveyi
Pathway
vhr03030  DNA replication
vhr03430  Mismatch repair
vhr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL538_01410
   03430 Mismatch repair
    AL538_01410
   03440 Homologous recombination
    AL538_01410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vhr03032]
    AL538_01410
   03400 DNA repair and recombination proteins [BR:vhr03400]
    AL538_01410
Enzymes [BR:vhr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL538_01410
DNA replication proteins [BR:vhr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL538_01410
DNA repair and recombination proteins [BR:vhr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL538_01410
SSDB
Motif
Pfam: RNase_T NitrOD5 RNase_H_2
Other DBs
NCBI-ProteinID: AMF96483
UniProt: A0A3A1Q127
LinkDB
Position
1:complement(319946..320692)
AA seq 248 aa
MWFSKQKQDSRDLLDTSQTPDWAVFFEQLSEQAKDTRLKRYYSTPIVNGDTPLKEVPFVS
VDFETTGLNAEEDAILTIGLVPFTLGRVQCSGSRHWVVNPNRELNEESVVIHGITDSEVK
NAPQLEQILDAILDALAGKIVVVHYKNIERQFFNNALLNSIGEGIQFPVVDTLDIEYAIQ
RRQCEGWLNKLKGKKPGSVRLGHARERYHLPVYQPHHALTDALATAELLQAQLQYHFDGD
MPLSVVWQ
NT seq 747 nt   +upstreamnt  +downstreamnt
atgtggttttctaaacagaagcaagatagtcgagatttgcttgataccagccagaccccc
gattgggcggttttcttcgagcaactttccgaacaagcgaaagatactcgattaaaacgt
tattactctacgcctattgtgaatggtgatacgccactaaaagaggtaccgtttgtctcc
gtcgattttgagactactggcttaaacgcagaggaagacgccattctcaccataggcttg
gtaccatttaccctaggccgcgtacagtgcagtggctctcgtcattgggttgtgaatcca
aatcgagaactgaatgaagagtcggtggtgattcacggcattaccgattctgaagtgaag
aatgcacctcaacttgaacaaattcttgatgccattcttgatgcgttggcaggtaagatt
gtggtcgtgcactacaaaaacattgagcgacaattcttcaataatgccttgttaaacagt
ataggtgaggggattcaatttccagtcgttgacaccttggatatcgaatacgcaattcag
cgtcgacaatgtgaaggttggttaaataaactcaaaggtaaaaagcctgggtctgtgcga
ctcggacatgcgcgtgagcgttaccatttacctgtttatcagcctcatcatgcccttacg
gatgcacttgcaaccgccgagttgttgcaggcacaactgcagtatcactttgacggtgac
atgccattgtccgtggtttggcaatag

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