Vibrio harveyi: AL538_02055
Help
Entry
AL538_02055 CDS
T04380
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AL538_02055
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vhr01007
]
AL538_02055
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vhr03016
]
AL538_02055
Enzymes [BR:
vhr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AL538_02055
Amino acid related enzymes [BR:
vhr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AL538_02055
Transfer RNA biogenesis [BR:
vhr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AL538_02055
Prokaryotic type
AL538_02055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AMF96600
UniProt:
A0ABN4KXY8
LinkDB
All DBs
Position
1:complement(459616..462021)
Genome browser
AA seq
801 aa
AA seq
DB search
MKFSESWLREWVSPSITTDELTHQITMAGLEVDDVLPVAGSFNGVKVGHVVECGQHPDAD
KLRVTKVDVGEEELLDIVCGAHNCRQGLKVAVATVGAVLPGDFKIKKAKLRGQPSHGMLC
SFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAREVG
VLNRADVTEPSVEAVAASIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPLWMQEKLRR
CGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGSEAELNAD
TLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLHTDSSMRF
ERGVDYALQVSAMARATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTKLDNLLGHH
IADADVVEILERLGLTVEASEEGWVAVAPTWRFDIAIEQDLIEEVGRIYGYDNIPNQHPA
AALKMHNHVEADLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLVLPNPISAD
MSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEPMLAGVIAGTR
GEEHWDIETNTVDFFDLKGDLEAILELSANEKAYSFAALSPESKKANPALHPGQSAAIIV
DGKEVGVIGTVHPELERKFGLNGRTIVFEIEWSAINSKVIPEAVALSKFPSNRRDIAVVV
DEAVASGDIVNACVEQGGEFLKDAKLFDVYVGKGVEEGKKSLAIALTLQSLERTLEDADI
AGAVDAIVAHVSEKFGASLRD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagcgaatcatggcttcgtgagtgggttagtccttcgattaccactgacgaa
ctaactcaccaaattacaatggcgggtctagaagttgatgacgtgctacctgtagcaggt
tcgttcaacggcgttaaagttggtcacgttgttgaatgtggtcaacacccagatgcagac
aaactgcgcgttactaaagtagacgtgggtgaagaagagcttctagacatcgtttgtggc
gcacacaactgtcgccaaggtctgaaagtagcagtagcaacggttggtgctgttcttcca
ggcgattttaaaatcaaaaaagcaaaactacgtggtcaaccatctcacggcatgctttgt
tcgttcactgaactaggtatcgatgttgagtcagatggcatcatggagctagcagaagac
gcagtaatcggtaccgatttccgtgaattcctaggtctagacgacgtaacagtagacgta
gacctaacggcaaaccgcgctgactgtttcagcattcgtggtctagctcgcgaagttggc
gtactaaaccgagctgacgtaactgagccatcagtagaagcagtagcagcttcaatcgaa
gataaagtgtctatcgaagtgaaagcgccagctgcgtgtccacgttacctaggtcgcgtt
gttaagaacgtaaacgttcaagctgaaacgccactatggatgcaagagaagctgcgtcgt
tgtggtattcgttctatcgaccctgtagtagacatcactaactacgttcttttagagcaa
ggtcaaccaatgcacgcattcgatctagcgaagatcgaaggtggcatcgtagttcgtatg
gctgagcaaggtgagaagctaacacttcttgacggtagcgaagcagaactaaacgcagat
acactagttgttgctgaccacaacaaagcacttgcaatcgcaggtatctttggtggtgaa
gagtctggtgtaacaacggaaactaaagacgttctactagagtgtgcattctttgcacct
gaccacatccgtggtcgcgcacgtagttacggtcttcacactgattcttcaatgcgtttt
gaacgtggtgtggattacgcactacaagtgagcgcaatggcgcgcgcaactcagcttctt
gttgagatctgtggcggtgaagtcgcacctgttgttgctgtagagtctgaagcagaccta
cctaagccaaacaaagttgctctacgtcgtactaagctagacaacctattaggtcaccac
atcgctgatgctgacgtagtagaaatcctagagcgcctaggtttgacagttgaagcttct
gaagaaggttgggtggcagtagcaccaacatggcgtttcgatatcgctatcgagcaagac
ctgattgaagaagttggtcgtatctacggttacgacaacattcctaaccaacacccagca
gcagcacttaagatgcacaaccacgttgaagcggaccttccactgaaacgcgttcgtgat
cttcttgttgaccgtggttaccacgaagcaatcacatacagcttcgttgagcctgagcaa
caaaagctagttgtacctggtgttgagcctctagtgcttccaaacccaatttctgcagac
atgtcagcaatgcgtcttggtcttatccaaggtctgctgaacacggttgttcacaaccag
aagcgtcaacagccacgcgttcgtctatttgaatatggtctacgtttcatcccatgtgaa
tctgcagaaaacggtatgcgccaagagccaatgcttgccggtgttatcgcaggtactcgc
ggtgaagagcattgggatatcgaaactaacactgttgatttcttcgaccttaaaggcgat
ctagaagcaattctagagctatctgctaacgaaaaagcgtactctttcgctgcactgtca
cctgaaagcaaaaaagctaacccagcacttcacccaggtcaatctgcggcaatcatcgta
gatggtaaagaagtgggtgtgatcggtactgttcacccagaacttgagcgtaagttcggt
ctaaatggtcgtactatcgtattcgaaatcgaatggtctgcaatcaacagcaaagtgatc
ccagaagcggtagcactttctaaattcccttcaaaccgtcgtgatatcgcggtagtcgtg
gatgaagctgttgcatctggtgatatcgttaacgcttgtgtagagcaaggtggcgagttc
cttaaagatgcgaagctgttcgacgtttacgtaggtaaaggcgttgaagaaggtaagaag
agcctagcaatcgctctgactctacagtcacttgagcgtactctggaagatgcagatatc
gctggtgcggttgacgctatcgttgctcatgtttctgagaagtttggtgcgtctctacgt
gactaa
DBGET
integrated database retrieval system
