Vibrio harveyi: AL538_03080
Help
Entry
AL538_03080 CDS
T04380
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vhr
Vibrio harveyi
Pathway
vhr03030
DNA replication
vhr03430
Mismatch repair
vhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL538_03080
03430 Mismatch repair
AL538_03080
03440 Homologous recombination
AL538_03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vhr03032
]
AL538_03080
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_03080
Enzymes [BR:
vhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL538_03080
DNA replication proteins [BR:
vhr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL538_03080
DNA repair and recombination proteins [BR:
vhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL538_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
AMF99369
UniProt:
A0ABN4L1P6
LinkDB
All DBs
Position
1:633327..634058
Genome browser
AA seq
243 aa
AA seq
DB search
MRREVIKKLFQKPSIQWPVKFQQKLERATDERLVAFYGKALPAPETPLSQVEFVALDFET
TGLNPQKNGIITIGLVPFDLNRIFLRQAKHWKVRPQEKLDEESVIIHGITHSELIDAPDL
GEILAPLLESLAGKIVVVHYRRIEREFLDQALRSRIGEGIEFPVLDTLQIEENIQQKAAG
GLWNKLKGNKPKSLRLAQSRRRYGLPDYTPHHALTDAIATAELLQAQIAHHYNPEQPISS
LWL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcgtgaagtgataaagaagttatttcaaaagccgagtattcagtggccagtgaag
tttcagcagaaacttgagcgtgccactgatgaacgcttagtcgccttttacggtaaagcg
ctgccagcacctgaaacgccactatcccaagtggagttcgttgcgcttgattttgagact
accggtttgaacccacaaaaaaacggcatcatcaccattggtttggtgccgttcgatctc
aatcgaattttcctacgccaagcaaagcactggaaggtgcgaccacaggaaaaactcgat
gaagaatcagtcatcattcatggtatcactcacagtgaactgattgacgctcccgatctg
ggtgaaatcctcgctcccttgctagaaagcttagcgggtaagattgtagtggtacattac
cgccgtatcgagcgtgagtttctcgaccaagcactgcgctctcgtattggcgaaggtatt
gagtttccagttcttgatacgttgcaaattgaagaaaacattcaacaaaaagcagcgggc
ggtctttggaacaagctcaagggcaataagccaaaatcattacgcttagctcagtctcgc
cgtcgttatggcttaccagactatacaccgcaccatgctctaaccgatgccattgctaca
gcagagctgctgcaagcccaaattgcccatcattataacccagagcaacctatcagtagc
ctgtggttgtaa
DBGET
integrated database retrieval system