Vibrio harveyi: AL538_03225
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Entry
AL538_03225 CDS
T04380
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vhr03032
]
AL538_03225
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_03225
Enzymes [BR:
vhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AL538_03225
DNA replication proteins [BR:
vhr03032
]
Prokaryotic type
DNA Topoisomerases
AL538_03225
DNA repair and recombination proteins [BR:
vhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AL538_03225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
ApbA
DUF6674
Motif
Other DBs
NCBI-ProteinID:
AMF96811
LinkDB
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Position
1:complement(663717..666356)
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AA seq
879 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKMAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLVARGWDLGNVA
AMLERAGTDAARPEWLEEQYGIRDGQYFLTETQAQAILDLRLHKLTGLEHEKILDEYKAL
LDEIAELMHILASTERLMEVIREELEAVRDGFGDARRTEITAASHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFSTRGKTYR
LKVYQLPHATRTARGKPIVNILPLEEGERITAILPVDEFSPEKFIFMATGDGTVKKTPLN
QFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMKLADDDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDE
VEEVELPEGEETEATDANAEGQTPEAPAADDAAEGSEEE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tatctagactacgcgatgtctgtcatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccacac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcagccgttctcacttcgttac
atgctggtcgatggtcaaggtaactttggctcgatcgatggcgactctgctgcggcaatg
cgttataccgaagtacgtatggcgaaaatggcccacgaacttctggctgacctagacaaa
gaaactgtggactacgtacctaactacgatggtacggagcaaattcctgcagttcttcct
actaaaattcctaacctactggtaaacggttcttccggtatcgcggtaggtatggcaacc
aacatcccgccacataaccttggcgaagtgatcgatggctgtcttgcatacatcaataat
gaagaaatcactattgatgagctaatggattacattcctggtcctgatttcccaactgcg
gcgcttatcagcggtcgtaaaggtattgtagacgcgtacaaaacaggtcgcggcaaaatc
tacatgcgttcaaaagcggaaatcgaagtggagaagaatggtaaagaaaccatcatcgtc
actgaaatcccttaccaggtgaacaaagctcgtttgatcgagaagatcgctgagctagta
aaagataagaaagtagaaggcattagtgcgttacgtgacgagtctgataaagatggtatg
cgtatcgtaattgaatgtaagcgcgatgcagtgggtgaagttgttctaaacaacctttac
gcacaaacccagcttcaaacgactttcggtatcaatatggttgcgctagacaatggccag
ccaaaactattcaacctaaaagagatgttgaagtgtttcgttgaccaccgtcgtgaagtt
gttactcgtcgtactatcttcgaactacgtaaagctcgtgaacgtgcacatatccttgaa
ggtttggcgcttgcactagcgaacatcgatgaaatcatcgaacttattcgtaaagctcca
acacctgcagaagcgaaagcaggccttgtggcgcgcggttgggaccttggcaacgtagcg
gcaatgctagagcgtgcgggcaccgatgctgctcgtccagaatggctagaagagcaatac
ggcatccgtgacggccagtacttcctgactgaaactcaagctcaagcgattctagaccta
cgtctacacaagctaactggtcttgagcacgagaagattcttgacgaatacaaagcactt
ctagatgaaatcgcagagctaatgcacatccttgcaagcactgagcgtttgatggaagtg
atccgtgaagagcttgaagcggttcgtgatggtttcggcgatgcacgtcgtacagaaatc
acagcagctagccatgacattgacatggaagagctgatcgctcgtgaagacgtagtagta
actctgtctcacgaaggttacgttaagtaccaaattctaagcgactacgaagctcagcgt
cgtggtggtaaaggtaagagtgcaacgaagatgaaagatgaagacttcatcgaacgtcta
cttgttgcaaatacccacgataacattctatgtttctcaactcgtggtaagacttaccgt
ctgaaagtttaccaattacctcatgcaactcgtactgcacgtggtaagccaatcgtaaac
atccttccgctagaggaaggcgaacgtatcacggcaatccttccggtagatgagttctct
ccagagaagtttatcttcatggctacgggtgacggtacggttaagaagacacctctgaac
cagtttgctaacgtacgttcaaacggtctgatcgcagttaacctacgtgatgatgactct
ttgatcggcgttgatatcactacaggttcaagcgatatcatgctgttctctaaagcaggt
aaagtggttcgctttagcgaagacaaagtacgtgcaatgggtcgtacagcggcaggtgtt
cgcggtatgaagctagcagatgatgatcaagtggtttctttgatcgttccatcaaacgaa
ggcgatatcctaacggttactcaaaacggttacggtaaacgtactgaactagcggaatac
ccaacgaaaggtcgtgcaactcagggcgttgtgtctatcaaggtttctgagcgtaatggt
ccagtagttggcgcggtacaagtagaagaaggcgacgagatgatgatgatcaccgacgct
ggtactctagttcgtacacgtgttgcggaagttagccaagttggtcgtaatactcaaggt
gtaacacttatccgtacagctgaagatgagtcagtggttggtttgcagcgtattgatgaa
gttgaagaagtagaactgccagaaggcgaagaaacggaagcaacagatgcaaatgcagaa
ggtcaaacgcctgaagcaccagcagcggatgatgcagcagaaggttctgaagaagagtaa
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