Vibrio harveyi: AL538_03345
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Entry
AL538_03345 CDS
T04380
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vhr03009
]
AL538_03345
Enzymes [BR:
vhr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AL538_03345
Ribosome biogenesis [BR:
vhr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AL538_03345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMF96831
UniProt:
K5TY26
LinkDB
All DBs
Position
1:complement(689936..690874)
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AA seq
312 aa
AA seq
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MSEKLQKVLARAGHGSRREIESLIKSGRVSVNGIVAKLGERLEDENSVVRIDGHIVSAKA
QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGEVNEKKVRNLVSGVELEDGMARFEDVVHAGGEGMN
HTFYVVINEGRNREVRRLWESQECTVSRLKRVRYGDIFLDKKLPRGGWMELDLKEVNYLR
ELVELRPEKETMLDLNKDNTSRKRERARSQKIRRAVKRHEERVNTPKGRSNNPSRRKPKK
TAGDQGARNKHR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagttacaaaaagtattagcacgtgctggacacggttctcgtcgtgagatc
gaatcgttaattaaatctggtcgcgttagcgtgaacggaatcgtagctaaacttggtgaa
agactagaagatgagaacagcgtagttcgtatcgatggtcacattgtgtctgcaaaggca
caagaagaagtgatctgtcgtgtattggcttactacaagccagaaggtgaactatgtact
cgtcacgaccctgaaggtcgtcgcactgttttcgatcgtctgccaaaaattcgtggctct
cgttggatttcagttggtcgtcttgatgcgaacacatctggcctactgcttttcacaact
gatggtgaattggcaaaccgcctaatgcacccaagccgtcaggttgagcgtgaataccta
gtgcgtgtgtttggtgaagtgaacgagaaaaaagttcgtaacctagtaagtggtgtagaa
cttgaagatggtatggctcgttttgaagacgtagtacacgcgggtggtgaaggtatgaac
cacacgttctacgtagtaattaacgaaggtcgtaaccgtgaggttcgtcgtttgtgggaa
tctcaagaatgtacggttagccgtctaaaacgtgttcgttacggtgatatcttcctagac
aagaaactacctcgtggtggttggatggaacttgacctgaaagaagtgaactacctgcgt
gagcttgtagaacttcgtccagagaaagaaaccatgcttgatctgaacaaagacaacaca
tcacgtaagcgtgaacgtgctcgtagccaaaaaatccgtcgcgcagttaagcgtcacgaa
gagcgtgttaacacaccaaaaggtcgcagcaacaatccttctcgtcgtaagccgaagaag
actgcaggtgaccaaggtgcacgtaacaagcatcgttaa
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