Vibrio harveyi: AL538_05125
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Entry
AL538_05125 CDS
T04380
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vhr
Vibrio harveyi
Pathway
vhr02020
Two-component system
vhr02040
Flagellar assembly
vhr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL538_05125
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL538_05125
09142 Cell motility
02040 Flagellar assembly
AL538_05125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vhr02022
]
AL538_05125
02035 Bacterial motility proteins [BR:
vhr02035
]
AL538_05125
Two-component system [BR:
vhr02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
AL538_05125
Bacterial motility proteins [BR:
vhr02035
]
Flagellar system
Flagellar assembly proteins
Others
AL538_05125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
AAA_16
Mg_chelatase
HTH_20
MCM
DUF2089
MerR
AAA_19
HTH_24
HTH_11
FleQ
HTH_Mga
HTH_28
AAA_7
AAA
AAA_3
HTH_Crp_2
HTH_5
Sigma70_r4_2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AMF97168
UniProt:
K5U7D4
LinkDB
All DBs
Position
1:complement(1077499..1078908)
Genome browser
AA seq
469 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWLEADCAEDALVKLKSNAVDIVVSDVQMAGM
GGLALLRNIKQNWPNMPVLLMTAYANIEDAVSAMKEGAIDYMAKPFAPEVLLNMVSRYAP
IKSDDNGDAVVADEKSLRLLALADKVARTDANVMILGPSGSGKEVMSRYIHNASNRKDGP
FVAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLSLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVSEGNFREDLYYRLNVFPIAWPAL
CERKGDISPLAQHLAERHCSKMGMPVPKFSQVALDKLLQYPWPGNVRELDNVVQRALILS
ENGDIDAEHILLEGVDWQDANSLQHVVQNAEMVVPDVKPVAQAEPINRVASGGEGLGGEL
RDQEYAIILETLIECNGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaagcaaagtgctgatcgtagaagacgatgaaggtcttcgtgaagccctagtg
gatactctggctctggctgggtatgagtggttagaagccgattgtgcagaagacgctttg
gtgaaactgaagtcgaacgcggtagacatcgtagtttcagatgtacaaatggcaggtatg
ggtggcttagcgctgctccgtaatatcaaacagaattggccaaatatgcccgttctgctt
atgacggcttatgcaaacattgaagacgccgtgtcggcaatgaaagaaggtgcgattgat
tacatggcgaagccatttgcaccagaagtcttgctcaacatggtaagtcgctacgcgcca
attaaaagtgacgacaatggtgacgcggtagttgcagatgagaaaagtctgcgtctgctt
gctctagctgacaaagtagcgcgcactgatgccaacgttatgatcttaggtcctagcggt
tctggtaaagaggttatgtcgcgttacattcacaacgcttcaaaccgtaaagatggtcca
tttgttgccattaactgcgctgcgatcccagataacatgcttgaagcgacgctgtttggc
tacgaaaaaggtgccttcactggggcagttcaagcttgtccaggcaaattcgaacaagca
caaggcggtaccatcttgctagatgaaatcagcgagatggacttgagtctgcaagcgaag
ttactacgtgttttacaagagcgtgaagtggagcgtctgggcagtcgtaagagtatcaag
cttgatgttcgcgtacttgcaaccagcaaccgcgatcttaaacagtacgtttcagaagga
aacttccgtgaagacttgtactaccgtttgaatgttttcccaatcgcatggccagcactc
tgcgaacgtaaaggtgacatctcgccacttgcgcagcatcttgctgagcgccattgcagc
aagatgggtatgcctgtgcctaagttctctcaagttgcattagataagctgcttcaatac
ccatggccgggtaacgttcgtgagctggataatgtggttcaacgtgcgttgattttgagt
gaaaacggtgacatagatgctgaacatattttgctagaaggtgtagattggcaagatgca
aacagtctgcaacatgttgttcagaatgcagaaatggtcgtaccggatgtcaagccagtc
gcacaagcagagccaatcaaccgagtagcgtctggtggcgaaggtctaggcggggaactc
cgtgaccaagaatacgccattattttggaaacattgatcgaatgtaacggacgtcgtaaa
gaaatggcagaaaaactgggtattagcccacgaactctgcgctacaaacttgctaaaatg
cgtgacgctggtatcgatattccggcttag
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