Vibrio harveyi: AL538_05135
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Entry
AL538_05135 CDS
T04380
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vhr
Vibrio harveyi
Pathway
vhr02020
Two-component system
vhr02040
Flagellar assembly
vhr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL538_05135
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL538_05135
09142 Cell motility
02040 Flagellar assembly
AL538_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vhr03000
]
AL538_05135
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vhr02035
]
AL538_05135
Transcription factors [BR:
vhr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AL538_05135
Bacterial motility proteins [BR:
vhr02035
]
Flagellar system
Flagellar assembly proteins
Others
AL538_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
AAA
AAA_7
MCM
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMF97170
UniProt:
A0A3A1PX54
LinkDB
All DBs
Position
1:complement(1080139..1081605)
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AA seq
488 aa
AA seq
DB search
MQGLAKLLVIDDDAPSRLNISNILEFVGESCEAVSSDQLGDVDWSSVWSGCIVANISAGQ
AATAVMTQLNEAYHIPLLVMGSFPLPVDDLPNFVGELEQPLNYPQLSEALRHCKDFLGRK
GVNVVASARKNTLFRSLVGQSRGIQEVRHLIEQVSGTEANVLILGESGTGKEVVARNIHY
HSAYRNGPFVPINCGAIPPELLESELFGHEKGAFTGALTARKGRFELAEGGTIFLDEIGD
MPMSMQVKLLRVLQERCFERVGGNTTIKVNVRVVAATHRDLETMIDDGTFREDLFYRLNV
FPIEMPALKARKQDIPLLLQELMTRLEAEGGQPICFTPRAINSLMEHNWPGNVRELANLV
ERMVILYPNSLVDVNHLPTKYRYSDIPEFQPEGNPFTTVEEQERDVFQDIFSENFSFEEQ
SDLDHNMNAPQALPPEGVNLKELLADMEVNMISQALEAQGGVVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaagctgcttgtaatcgatgacgacgcaccaagtcgtttaaatata
agcaatatattggaatttgttggagaaagttgcgaagctgtcagttctgatcagctaggc
gatgtagactggtctagtgtttggtcaggttgtattgtggctaacatctctgccggtcag
gctgcgacagcagtaatgacacaactcaatgaagcgtaccatatccctcttctcgtcatg
ggctctttcccattgcctgttgatgacttgccaaattttgtcggtgaattagagcaacct
ctaaactacccgcaacttagcgaagcgttacgtcactgcaaagactttcttggtcgcaaa
ggtgtaaacgttgttgcaagtgctcgcaaaaacactcttttccgcagtctcgttggtcaa
agccgtggtatccaagaagttcgtcatttgattgaacaagtatcaggtacagaggcaaac
gtcttgatcttgggtgaatcagggacaggtaaagaagtggtggcgcgcaatatccactat
cattctgcttaccgcaacggtccgtttgtgccaattaactgtggtgcgatcccaccagag
cttttagaaagcgagctgtttggtcatgaaaaaggtgcatttaccggagctttaacggca
cgtaaaggtcgttttgaattagcagaaggtggcacgatcttccttgatgagattggtgat
atgccaatgtctatgcaagtgaagctgttgcgcgtattgcaagagcgctgctttgagcgt
gttggtggcaatacgacgatcaaagtcaacgttcgtgttgtagctgcaactcaccgtgat
ctcgaaaccatgatcgacgatggcacgttccgtgaagacctcttttaccgcttgaatgta
ttcccaattgaaatgcctgcgctaaaagcgcgtaagcaagacattcctttgctgctgcaa
gagctaatgacgcgtcttgaagctgaaggcggacaaccaatttgcttcactcctcgtgct
atcaactcgctgatggaacacaactggccaggtaacgtacgtgaacttgctaaccttgtt
gagcgtatggtgatcctatacccgaatagcttggtcgatgtgaatcatcttccgactaaa
taccgctacagtgatattcctgagttccaacctgaagggaacccattcacaacagtggaa
gagcaagagcgtgatgtattccaagatatcttctctgaaaacttcagctttgaagagcag
agcgatcttgaccacaacatgaatgcacctcaagcactgccaccggaaggagtcaacttg
aaagagttgttagccgatatggaggtcaacatgatcagccaagcgttagaagcgcaaggc
ggtgtagtggcgcgagcggcagatatgctcggtatgcgtcgtacgacattggttgagaaa
atgcgtaaatacaacctacagcgctag
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