Vibrio harveyi: AL538_06040
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Entry
AL538_06040 CDS
T04380
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_06040
DNA repair and recombination proteins [BR:
vhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AL538_06040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
Rad51
GvpD_P-loop
SLFN-g3_helicase
AAA
ABC_tran
AAA_22
AAA_16
RecA_N
AAA_14
NTPase_1
nSTAND_NTPase5
AAA_29
AAA_24
Zeta_toxin
AAA_5
nSTAND3
Viral_helicase1
Zn_ribbon_8
Zn_ribbon_Thio2
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AMF97342
UniProt:
K5TWD9
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All DBs
Position
1:complement(1278618..1279997)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRIAASPTVARNERLSGYAGSATES
KVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCLLSA
QMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVNNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaacgagcgtatgtttgtaatgattgtggcgcagatttcccacgttgg
caggggcagtgtaatgcgtgtggtgcatggaacacgattactgaagttcgtattgctgca
tcgccaacggtagcgcgcaatgaacgcttatctggttatgcaggctcagcgacggaatca
aaagttcagacgctttccgagattgatctgcaagaagtgccgcgtttcaccagtgggttt
aaagaactcgatcgtgtacttggcggtggtgtggttcctggtgcggcgattttgattggt
ggtaacccaggggcaggtaagtcaacgttacttctacaaaccatgtgtttgttgtcggcg
caaatgcctacgctgtacgtaacgggtgaggaatcacttcagcaagttgcgatgcgtgct
tcccgtcttggtttgccaaaagagcatttaaagatgctgtcagaaacgaatgtcgataag
atctgccaaattgcagagaaagagcaaccacgcattatggttatcgactcgatacaggtt
atgcacgtttctgatgttcaatcctcaccggggagtgtcgctcaagtacgtgaatcggca
accgccttgacgcgttacgcaaagcaaaacaatgttgctgtctttattgttggtcacgta
acaaaagatggtacccttgcgggacctaaagtacttgagcacattattgactgctccgtg
ttgctagatggtgggactgatagccgtttccgtacgcttcgtagtcacaaaaaccgtttt
ggtgcagtgaacgagctcggtgtttttgccatgacagggcaagggttaaaagaagtgaac
aacccatcggcgatcttcctttctcgtggtgaagaggagacgtcgggttcctccgtgatg
gttgtttgggaaggtacgcgccctctactagtagagattcaagcgctagtagactattca
caactggcaaacccacgtcgtgtcgcggttggcttagaacaaaaccgtctctctttatta
ctagcggtactgcataagcatggtggtctacaaatggcagaccaagatgtatttgtgaat
gtcgttggtggcgtcaaagtcacagagaccagtgctgaccttgcgttagttatggcgctt
ttatcgagtttccgcgaccgtccactaccaaaagatgtggtggtgtttggggaagtgggc
ttggcgggtgagattcgacctgtaccaagtgggcaagagcgtttgaatgaagcgtttaag
cacggctttaagaaagcaatcgttcctgcagcgaatatgcccaagggcggtattcctggt
atgcaaatccacggcgtgaaaaaactatcggaagctatcgaagcatttgatgagttgtaa
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