Vibrio harveyi: AL538_06165
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Entry
AL538_06165 CDS
T04380
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vhr03016
]
AL538_06165
Enzymes [BR:
vhr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL538_06165
Transfer RNA biogenesis [BR:
vhr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL538_06165
Prokaryotic type
AL538_06165
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AMF97366
UniProt:
A0A3A1QBX5
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All DBs
Position
1:complement(1307612..1308556)
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AA seq
314 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVETRPIDVNLEKLEACIDTFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHRDEVAPKELLDPLL
LPMDTAVEDLPEVNLNAELTNLVQHGMPVQVLGAPEGTPIRMTSGEEKLFIGVAEVNNDG
KVAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggcgttatcttgttggataaaccaaca
ggtatttcttcaaatgatgcactgcaaaaagtaaagcgtatctactttgctgagaaagcg
ggtcatacgggtgcattggacccattagcgacgggcatgttgccaatctgcttaggcgaa
gcaaccaagttttctcagttcttgctggattcagacaagcgctaccgtgtaatcgcaaaa
ctgggtgagcgcactgatacgtctgattctgatggcgaagtggtagagacacgtcctatt
gatgtgaacctggagaagctagaagcgtgcattgatacgttccgtggtgaatcagaccaa
gtaccttcaatgttctcagcattgaaataccaaggcaagccgttgtacgagtacgctcga
aaaggcattgaagtaccacgtgaatctcgcaagatcacggtatatgaaatcgtacttcac
cgttttgaaggtgatgaagttgagatggaagtgcactgctcaaaaggtacttacatccgt
acaattgttgatgacctaggtgagatgcttggttgtggcgcacacgtgactatgcttcgt
cgtactggtgttgctaaatacccgtacgaaaaaatggtgacgctagagcaacttaatgag
ctgcttgagcaagcgcatcgtgatgaagtggcaccaaaagagttgcttgatccactgcta
ctgccaatggacactgccgttgaagatttacccgaggtaaacctaaacgcagagctgact
aacctagtacaacacggtatgcccgtgcaggtgttgggtgcgccagagggtacgccaatt
cgtatgacttctggtgaagagaagctgtttatcggtgtagcagaagtcaacaacgatgga
aaagtagcaccaaaacgtttggtggttttccgcgacgaagagtaa
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