Vibrio harveyi: AL538_06785
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Entry
AL538_06785 CDS
T04380
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
vhr
Vibrio harveyi
Pathway
vhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL538_06785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_06785
DNA repair and recombination proteins [BR:
vhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AL538_06785
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AL538_06785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AMF97474
UniProt:
K5UJA8
LinkDB
All DBs
Position
1:complement(1448507..1449238)
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AA seq
243 aa
AA seq
DB search
MSNQSSEGFQRCFVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTP
LLLKWSGKGSMKTLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLH
ALTELAQSDNPEPGLRRFELALLSSMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASV
RRDNLTFLGNELIAISERRFVTKEQLKAAKRFTRMALKPYLGGKPLKSRELFIQTYRARS
NGK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccagtcttcagaaggcttccagcgctgctttgtattgcaccgacgcccttac
agtgaatcgagcttgatccttgatgtattcagcgaggagtatggtcgtatcacgttgatg
gcgaaaggtgcgcgcagcaaacgctccaatcttaaaggggcattacagcccttcacgcca
ctattgttgaaatggtccggcaaaggctcaatgaaaaccttacgtcaggctgagccaatc
agtttgggtttgccgttgttcgggataaacctttactccgcaatgtacgtaaatgaatta
gtcgggcgcgtgttaatggcggaggtgccgatgccagccctgtttcatgattatctacat
gcactaacggaattggctcagagtgataaccctgaaccgggattgcgtcgttttgaattg
gccctgctgtcttcaatgggctatggcgtcgatttcttgcattgtgccgggacgggggag
cctgtcgatcctgagatgacttaccgttatcgtgagcaaaagggattcatagcttcagta
aggcgcgacaacctgacatttttaggtaatgaattgattgcgattagcgaacggcgattc
gtcactaaagagcaattaaaagcggcgaaacgctttacacgtatggcattaaagccgtat
cttggcggcaaacctttaaaaagtcgcgaattattcattcagacatatcgagcacggagt
aacggaaaatga
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integrated database retrieval system
