KEGG   Vibrio harveyi: AL538_09120
Entry
AL538_09120       CDS       T04380                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vhr  Vibrio harveyi
Pathway
vhr00300  Lysine biosynthesis
vhr00470  D-Amino acid metabolism
vhr01100  Metabolic pathways
vhr01110  Biosynthesis of secondary metabolites
vhr01120  Microbial metabolism in diverse environments
vhr01230  Biosynthesis of amino acids
Module
vhr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AL538_09120
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AL538_09120
Enzymes [BR:vhr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     AL538_09120
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AMF97858
UniProt: A0A3A1Q4D6
LinkDB
Position
1:complement(1918885..1919715)
AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILDVEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDKTLFCGAVSMGNPHVVTVVDDVDTAEVETLGPL
LESHERFPERVNAGFMQVVNRNHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDENV
KVSLPGGDLRISWQGPGKPLFMTGPATHVFDGQLSC
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcatttccacttttccaaaatgcacggtttgggcaacgactttatggtcgtcgactgc
attacccagaacgtgtttttctcgcaagatttgatccgtcgtttggcggatcgtcacacg
ggcgtcggttttgaccaattgctcgtggttgaagcgccttatgatccagaaaccgatttc
cattatcgcatttttaatgccgatggcagtgaagttgagcagtgtggtaatggcgctcgc
tgtttcgcgcgtttcgtccgtttgaaaggtttgactaataagtacagcatcagcgttagc
accaagaaaggtaagatgattcttgatgttgaagatgatggtgaagtcacggtgaacatg
ggcgtacctgaattcgagccgaacaagatccctttcaaagcgaagcagaaagagaaaacc
tacatcatgcgtgcaggcgataagaccctgttctgtggcgcggtgagcatgggtaacccg
cacgtggtgactgtggtcgacgatgtggatacggcagaagtggaaacactcggaccgcta
ttagaatcacacgaacgcttccctgagcgtgtgaacgcgggctttatgcaagttgtgaat
cgcaatcacatccgcctacgcgtgtatgagcgtggtgcgggtgaaacacaagcttgcggc
agcggtgcctgtggcgcagttgcggtgggcatcctgcaaggtctattggatgaaaacgtg
aaagtttcacttcctggtggtgacctacgcatatcttggcaaggtccaggcaaaccattg
tttatgaccggtccagcaactcacgtatttgatggtcaattgtcgtgctag

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