Vibrio harveyi: AL538_09120
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Entry
AL538_09120 CDS
T04380
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00300
Lysine biosynthesis
vhr00470
D-Amino acid metabolism
vhr01100
Metabolic pathways
vhr01110
Biosynthesis of secondary metabolites
vhr01120
Microbial metabolism in diverse environments
vhr01230
Biosynthesis of amino acids
Module
vhr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AL538_09120
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AL538_09120
Enzymes [BR:
vhr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AL538_09120
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AMF97858
UniProt:
A0A3A1Q4D6
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Position
1:complement(1918885..1919715)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILDVEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDKTLFCGAVSMGNPHVVTVVDDVDTAEVETLGPL
LESHERFPERVNAGFMQVVNRNHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDENV
KVSLPGGDLRISWQGPGKPLFMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccacttttccaaaatgcacggtttgggcaacgactttatggtcgtcgactgc
attacccagaacgtgtttttctcgcaagatttgatccgtcgtttggcggatcgtcacacg
ggcgtcggttttgaccaattgctcgtggttgaagcgccttatgatccagaaaccgatttc
cattatcgcatttttaatgccgatggcagtgaagttgagcagtgtggtaatggcgctcgc
tgtttcgcgcgtttcgtccgtttgaaaggtttgactaataagtacagcatcagcgttagc
accaagaaaggtaagatgattcttgatgttgaagatgatggtgaagtcacggtgaacatg
ggcgtacctgaattcgagccgaacaagatccctttcaaagcgaagcagaaagagaaaacc
tacatcatgcgtgcaggcgataagaccctgttctgtggcgcggtgagcatgggtaacccg
cacgtggtgactgtggtcgacgatgtggatacggcagaagtggaaacactcggaccgcta
ttagaatcacacgaacgcttccctgagcgtgtgaacgcgggctttatgcaagttgtgaat
cgcaatcacatccgcctacgcgtgtatgagcgtggtgcgggtgaaacacaagcttgcggc
agcggtgcctgtggcgcagttgcggtgggcatcctgcaaggtctattggatgaaaacgtg
aaagtttcacttcctggtggtgacctacgcatatcttggcaaggtccaggcaaaccattg
tttatgaccggtccagcaactcacgtatttgatggtcaattgtcgtgctag
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