Vibrio harveyi: AL538_10075
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Entry
AL538_10075 CDS
T04380
Name
(GenBank) GGDEF domain-containing protein
Organism
vhr
Vibrio harveyi
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
PAS_13
PAS_12
Motif
Other DBs
NCBI-ProteinID:
AMF98018
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Position
1:complement(2118576..2121023)
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AA seq
815 aa
AA seq
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MFRFAISPALMTDWKQALQQCCDATQAHGQLYTFSYTRQWRLSEVATSPQHHREIVAILE
PATEHFIYPQLVVEQTPFQNQTLSYCPVWLPSGELFAAFALVHPTEQDTVICGWLSALAG
RVGFDVAQTYHQEQQRHDVQLPDLLPSLQEFIDCLEDHTWIKSTDGRYAMTNRSVEDSWQ
MTGSEIVGKNDFELFSSRRAKKFIDTDQLVIATGSQNTVEECTLIDDNNNPTWLETIKSP
IRNQTGELIGILGMTRNVTRRKMVETQLSLASKIFDNSHEGMVITDRKANILDVNSAFTH
ITGYAAEEVIGKNPNILRSGHHDREFYQQLWRQLESKGQWKGEFINRKKDGSIYPQLATI
SAVMDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLISLLEQHIENGQ
KHQHAFATLFLDIDHFKHINDSMGHFCGDQLLTKLAERLQDVLHLRAHVARIGGDEFVII
LPNIKSDSQLIDTIEDILCLFNRPFEVSKNESLRISTSVGVARYPQDGQDSETLLKNADT
AMYLAKKNGRNGYAFYSPDLTDKSVSHVRMQSALHEAIEKNQLHLAYQPQYNLNANELVG
VEALLRWQHPDLGMISPADFIPIAEKTGLIQSIGKWVLEQACLQGRAWLDNGIEFGKLAV
NVSALQLQQSDFISKLGVILKETEFPAHRLELEITESFLLIDPQQAIASLNLLRELGIEI
SLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNTDSNAIVNAIIAMGQTLSLKVVAE
GIETDEQAQYLFERGCIYGQGFRFSAPVRAEKLFK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcttcgctatctcccctgcattgatgacagactggaaacaggctctgcaacaa
tgctgtgatgccacacaggcgcacggtcagctttatactttcagctacactcgccaatgg
cgcttgagtgaggtggcgacgtcgccgcaacatcatcgtgaaatcgtcgcgattctcgaa
cccgccactgagcactttatctatcctcagcttgttgttgaacaaacaccctttcaaaac
caaaccttaagttactgcccagtatggcttccgagcggtgagctgtttgctgccttcgcg
ttggttcatccaactgagcaagatactgtcatttgtgggtggttaagcgcattggctgga
cgtgtcggctttgatgttgctcagacttatcatcaagagcagcagcgtcacgatgttcaa
ttgccagacttactgccatccctgcaagaattcattgattgcttagaagatcacacgtgg
ataaaaagcaccgatggtcgctacgcgatgaccaaccgcagcgttgaagactcttggcaa
atgaccggcagtgaaatcgtcggcaagaatgacttcgagttgttcagcagccgtagagcg
aagaagttcattgataccgaccagctggtgatagccacgggcagccaaaacacggttgaa
gagtgcaccctaattgatgacaacaacaacccaacctggttggaaaccatcaaatcgcca
atccgtaatcaaaccggagagctgattggtattttgggtatgacacgcaacgtcactcgt
cgaaaaatggtggagactcagttgtcattggcgtccaaaatcttcgataactcccatgaa
ggaatggtgatcaccgaccgtaaagccaacattcttgatgtaaacagcgccttcacccat
atcactggttacgcagcagaagaagtgatcggtaagaacccaaatatcttgcgctctggg
catcacgaccgcgaattttatcaacagttgtggcgtcagctggaaagcaaaggtcaatgg
aaaggcgaattcatcaaccgcaaaaaagatggcagcatttacccacagctcgccaccatc
agtgcggtgatggacgataagaaccatctgatcaactacatctgtgtattcgaagacatc
tcggtacgaaaagcgcacgaagaaaagctgcaacgcatggcgttttacgatccattgacc
aatcttcctaaccgtacgcatttgatcagcttgctagaacagcacattgagaacggtcag
aaacatcaacacgcgtttgcgactctgttccttgatatcgaccacttcaagcacatcaac
gacagcatggggcacttctgtggcgaccagctgctgactaaactcgctgaacgtctgcaa
gatgtgctgcacttacgcgctcatgtggcacgtatcggtggcgatgagtttgtcatcata
ttgccgaatattaaatcggattcgcagctgatcgacaccattgaggacatactctgcctg
ttcaaccgtccttttgaagtcagcaagaacgaatctctgcgcatctccaccagcgtgggc
gtggcgcgttatcctcaagacggacaagacagcgaaaccttgctcaagaacgccgatacc
gccatgtacttggcgaagaaaaacggtcgtaacggctacgcgttctactcaccggatttg
accgataaatccgtgtctcacgtgcgtatgcagtctgctttgcatgaggcgattgagaaa
aaccaacttcatttagcgtaccagccgcaatacaacttaaacgccaatgaactggtgggc
gtagaagccctgctacgctggcaacatcctgatcttggaatgatttctccagcggacttt
atcccgattgcagagaaaacgggcttgattcaaagtattggtaaatgggtcttggagcaa
gcttgcttgcaaggtcgcgcatggctggataacggcattgaatttggcaagctcgcggtg
aatgtctcggctcttcagctacaacaatcagacttcatcagcaaacttggggttattcta
aaagagacagaattcccggcgcaccgcctagagctggaaatcaccgaaagcttcctactt
atcgatccacaacaagccatcgcatcactcaacttgctgcgcgagctcggcattgagatc
tcccttgatgactttggcaccggttactcgtcactgtcttacctcaaaggtttgccaatc
aacaaattgaagatcgaccgctctttcgtaagcgatgttccaagcaacaccgacagcaat
gcgatcgtgaatgccatcatcgcgatgggacaaaccctgtcattgaaagtggtcgcagaa
ggcatcgaaaccgacgagcaagcccaatacttattcgagcgtggctgtatctacggacaa
ggcttccgctttagcgccccagttcgtgccgaaaagttatttaaataa
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