KEGG   Vibrio harveyi: AL538_10135
Entry
AL538_10135       CDS       T04380                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vhr  Vibrio harveyi
Pathway
vhr03030  DNA replication
vhr03410  Base excision repair
vhr03420  Nucleotide excision repair
vhr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL538_10135
   03410 Base excision repair
    AL538_10135
   03420 Nucleotide excision repair
    AL538_10135
   03440 Homologous recombination
    AL538_10135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vhr03032]
    AL538_10135
   03400 DNA repair and recombination proteins [BR:vhr03400]
    AL538_10135
Enzymes [BR:vhr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL538_10135
DNA replication proteins [BR:vhr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AL538_10135
DNA repair and recombination proteins [BR:vhr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AL538_10135
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AL538_10135
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: AMF98030
LinkDB
Position
1:2132324..2135116
AA seq 930 aa
MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICIPGVEADDVIGT
LAYQASQQGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAALGFRGSKTMAKKLVDNK
DNAMLSYELATIKLDVELEETPESLLKAEPSTDELIKLYGQLTFKSWLNELLEGGTGVVE
ADESTGAARGGSASSKADMDTSAVKIDRSQYETILDEASFNAWLDKLKASELFAFDTETD
SLDYMVANLVGLSFATDEGIAAYVPVAHDYLDAPQQLDRDWVLEQLKPILEDEAQAKVGQ
NLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAGK
GKNQLTFNQIELDEASPYAAEDADVTLRLHNRLFANIEQDEKLKTVYEEIEMPLVPVLSR
IERTGVLIDDMKLSAQSVEIAARLDELEQKAYEIAEQEFNMNSPKQLQALLFEKMGLPVI
KKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPSTGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPTGYKILAVDYSQIELRIMAHLSG
DQALLDAFRDGKDIHAATAAEIMGVSIEDVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGI
PRGEAQAYMDKYFERYPGVMQYMEDTRSAASEQGFVETIFGRRLHLPEIQSRNGMRRKAA
ERAAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESSLSEIES
KVQNLMESAAELKVPLVAEAGHGDNWDQAH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggcaagtattcctgaaaatccgttgattctgatcgacggttcttcttatctatatcgc
gcttttcacgcttacccaggcacgatgagtaacggtgaaattccaactaacgcagtttac
ggtgtagtcaacatgttacgcagcatgatgcgtcagtttgcttctgatcgtattgcagtg
gttttcgatgcgaagggtaaaaccttccgcgacgatatgtacccggaatacaaagcgaat
cgtccaccaatgccggacgatcttcgttgccagattgaacctctgcacaacgttattcgc
gctatgggtctgccattgatctgtattcctggcgtagaagccgatgatgtgattggtact
ctggcttatcaagcatcgcagcaaggcatgcctgttttgatcagtactggcgataaagat
atggcgcagttggtggatgacaacgttaccttgatcaacaccatgaccaacgttgtgatg
gatcgtgaaggtgtggttgagaagtttggtatcccaccagaattgatcatcgactaccta
gcgttgatgggcgataaagttgataacattcctggcgttccgggtgtgggtgataaaacc
gctactgctttgctacaaggcattggcggtctgactaagctgtatgaaaacctcgacgat
atcgctgcgcttggcttccgtggttcaaaaaccatggctaagaagctagtcgacaacaaa
gacaacgcaatgctgtcttacgagctagcgaccatcaagttggatgtggagctggaggag
acgccagaatcattgctaaaagcagaaccaagcacagatgaactgatcaaactgtacggt
cagttgacgtttaagtcttggttgaatgagctattagaaggcggcacaggtgtagtagaa
gcggatgaatcaaccggcgctgcgcgtgggggctctgcttcatctaaagcagatatggac
acttcagcagtaaaaatcgaccgtagccagtacgaaaccatcctagatgaagcttcattt
aatgcttggttagacaagctaaaagcgtctgaattatttgcgtttgatactgaaactgac
agcctagattacatggtggcaaacttggttggtttgtcatttgcaactgacgaaggcatt
gctgcttatgtaccagtggctcatgactacctagatgcgcctcagcagctggatcgtgat
tgggtactggaacagctgaagccgattcttgaagatgaggctcaggcgaaagtcggtcaa
aacctaaaatacgatgcgtctgtgttggctcgctacggcattgagatgaaaggcatcaag
cacgacaccatgttggcgtcttacgtctacaacagtgtaggcggcaaacatgatatggac
agcttggcactacgcttcctacagcacagctgcatttcattcgagcaaatcgcaggtaaa
ggtaaaaaccaactgaccttcaaccaaatcgaactggatgaagcttcaccatatgctgca
gaagatgcagacgtgacacttcgtctacataaccgtttgtttgccaacatcgaacaagat
gaaaagctaaaaaccgtatacgaagaaatcgaaatgccactcgtgccagtgctgtctcgc
attgagcgcactggtgtgttgattgatgacatgaagcttagcgcacaatcggtagagatt
gccgcacgtctggacgagcttgagcagaaagcttatgaaattgcagaacaagagttcaac
atgaattctccgaagcaactgcaagcacttctgtttgaaaaaatgggtctaccagttatc
aagaagacgccatcaggcacaccttctactaatgaagaagtgctgcaagagctggctctg
gattacccactaccaaaactgattttggaataccgtggtctggcgaagctaaaatcaacg
tacaccgacaaactacctaagatgatcaacccatcaacgggtcgtgtgcatacttcttac
caccaagcagtgactgcaacgggtcgtctatcttcaaccgatcctaacttgcagaacatc
ccaattcgtaatgaagaaggtcgtcgtattcgtcaggcattcgttgcacctacgggttat
aagattctggcagtcgactactctcagattgaattacgtattatggcgcacctatcaggt
gaccaagcgctgcttgatgcgttcagagacggcaaagatatccacgcggcaaccgcagca
gaaatcatgggcgtttctatcgaagacgtttcaagtgagcaacgtcgccgtgcgaaagcg
gttaacttcggtctaatctacggcatgagtgcgtttggtttggcgaagcaattgggtatt
cctcgtggtgaagcacaagcctacatggacaagtacttcgagcgctacccaggcgtgatg
cagtacatggaagacacgcgcagtgcggcttcagagcaaggcttcgtcgagactatcttt
ggtcgtcgtctacatcttcctgaaattcaatctcgtaacggcatgcgtcgtaaagcggca
gaacgcgcagcgatcaatgcaccgatgcaaggcaccgctgcggacatcatcaagaaagcg
atgttactggttgatcaatggattcaagaagaaggcaacggtcgagtgaaacttctgatg
caagtacacgatgaactggtgtttgaagttgaagagtcgtctttgtccgaaattgaaagt
aaagtacagaatttgatggagtctgcagcagagctgaaagtgcctctagtggcagaagca
ggtcacggtgacaactgggatcaagcacactag

DBGET integrated database retrieval system