KEGG   Vibrio harveyi: AL538_10255
Entry
AL538_10255       CDS       T04380                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vhr  Vibrio harveyi
Pathway
vhr03070  Bacterial secretion system
vhr05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL538_10255 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AL538_10255 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vhr02044]
    AL538_10255 (gspD)
Secretion system [BR:vhr02044]
 Type II secretion system
  General secretion pathway protein
   AL538_10255 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom DUF4264
Other DBs
NCBI-ProteinID: AMF98054
UniProt: A0A454CWU4
LinkDB
Position
1:2162999..2165035
AA seq 678 aa
MKHWFSKSAWLLAGTLLCAPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEKQYYSFFLNVLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVLGDDSAQG
DSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDKEIEVVELRNASASEMVRIVDALNKTTNQKSTPEFLEPKIVADERTNSILISG
DPKVRARLKRLIRQLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQKGG
SSSAKRGEVVIAAHEATNSLVLTAPPDIMMALQDVISQLDIRRAQVLIEALIVEMSEGDG
INLGVQWGSLETGAVIQYGNTGAPIGQVMVGLEEAKDTTEKKPIRDSNTGAIKYYEETTV
KGDYSTLASALGGVNGAAMSIMMGDWTALITAVSSDSNSNILSSPSITVMDNGEASFIVG
EEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGA
VDVRFAKRQLNTSVMIQDGQMLVLGGLVDERALESESKVPLLGDIPVLGHLFKSTSTQTE
KRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAQEGLKLMDDSNIPVMPEFGQER
KHPAEIQAFIDQMVKNNG
NT seq 2037 nt   +upstreamnt  +downstreamnt
gtgaaacattggtttagcaaaagtgcttggttactagcaggtacactactctgcgcaccg
ggtgcgatggcgaacgagtttagtgctagcttcaaaggcacagacattcaagaattcatc
aacattgttggtcgtaacctagagaagaccatcatcgttgacccatcggtacgcggcaaa
atcgacgtacgcagctacgacgttcttaacgaaaagcaatactatagcttcttccttaac
gttcttgaggtgtatggctatgctgttgtggaaatggacaacggcgtactgaaagtcatc
aaggcgaaagattcaaaaacctctgcgattccagttttgggcgatgacagtgcgcaaggc
gacagcgtgattacacgtgtggtagcggtgcgtaacgtatcggttcgtgaattatcgcca
ctactgcgtcaacttatcgataatgcgggcgcgggtaacgtcgtgcactatgaccctgct
aacatcattttgatcacaggtcgtgctgcggtggttaaccgccttgctgaaatcatcaag
cgtgttgaccaagcgggtgacaaagagatcgaagtggttgagctgcgtaatgcatctgct
tctgaaatggttcgtatcgttgatgccctgaacaaaacgacgaaccaaaaaagcacacct
gaattcctagaaccaaaaatcgtagcggatgagcgtaccaactcaatcctgatttctggt
gacccaaaagtacgtgctcgtctgaagcgtttgattcgtcaacttgatgtcgaaatggcg
actaaaggtaacaaccgcgtggtgtacctcaagtacgctaaagcagaagacctagttgat
gtactaaaaggtgtctctgacaacctacaggctgagaagcaagcaggtcaaaaaggtggt
tcatcttctgcaaaacgtggtgaagtggtgattgcagctcatgaggcaactaactcgctc
gtactgacagctccgccagatatcatgatggcactgcaggacgtgatttctcagttggat
atccgtcgtgcgcaagtattgattgaagcgctaatcgttgaaatgtcggaaggtgatggt
attaaccttggcgttcaatggggctcgttggaaacgggtgcagttatccaatacggcaac
actggtgcaccgattggtcaggtgatggttggtctggaagaagcgaaagatacgactgaa
aagaaaccgattcgtgactcaaatactggtgcgattaagtactacgaagaaacgacagtg
aaaggtgactattcgaccctagcatccgctcttggtggtgttaatggtgcggcaatgagc
atcatgatgggtgactggactgcactgattacggcagtgtcatcggactcaaactcaaac
attctgtcctctccaagcattactgtaatggataacggtgaagcgtcattcattgttggt
gaggaagtgccggtaattactggttctactgcaggctcaaacaatgacaacccattccaa
acggtcgatcgtaaggaagtgggtatcaaactgaaagtggttcctcagatcaatgaaggt
gactctgttcaactgaacattgaacaagaagtttctaacgtgctaggtgcaaatggtgct
gtcgacgtgcgttttgctaagcgccaattgaacacttcagtaatgattcaagacggtcaa
atgctggttcttggtggcctagttgatgagcgtgcacttgaaagtgaatctaaagtgccg
ctgctgggcgatattccagtgcttggtcatctgtttaaatcaaccagcacacaaactgag
aagcgtaacttgatggtgttcatcaagccgaccattatccgtgatggtatgacggctgat
ggtattacgcagcgtaagtacaacttcatccgtgctgagcagctatacaaagcacaagaa
ggtttgaaactgatggatgattcaaacattccagtgatgcctgaatttggtcaggaacgt
aagcaccctgctgaaatccaagccttcatcgatcagatggtaaagaataatggttga

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