Vibrio harveyi: AL538_10950
Help
Entry
AL538_10950 CDS
T04380
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vhr
Vibrio harveyi
Pathway
vhr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL538_10950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vhr03021
]
AL538_10950
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_10950
Enzymes [BR:
vhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL538_10950
Transcription machinery [BR:
vhr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL538_10950
DNA repair and recombination proteins [BR:
vhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL538_10950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AMF98189
UniProt:
A0A0B4IMU9
LinkDB
All DBs
Position
1:2296523..2297515
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHNEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtctagttgacatcgaacaaatcagc
tcgactcacgcaaaagtaactcttgagccattagagcgtggctttggtcatactctaggt
aatgcacttcgccgcattcttctatcttctatgcctggttgtgcagtgacagaagtagaa
atcgaaggcgtacttcatgagtacagcactaaagaaggcgtacaagaagatattcttgaa
atccttctaaaccttaaaggtttggcagtgcgcgtagctgaaggcaaagatgaagtgttc
attactttgaacaaatcaggctcgggccctgtggttgcaggtgacatcacccatgacggt
gatgtagagatcgctaaccctgaacacgttatttgtcacctaacggatgacaacgctgag
atcgcaatgcgtatcaaagttgaacgtggtcgtggttatgttccagcttctgcgcgtatc
cataacgaagaagacgagcgtccaatcggtcgcctactagtagatgctacttacagccca
gtagacaaaattgcctacgctgtagaagcagctcgtgtagaacagcgcactgatctagac
aagcttgttatcgatatggaaacaaacggtactctagaacctgaggaagcaatccgtcgt
gcagctactatcctagctgaacaattggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccgatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatctagtacaacgtactgaggttgagctacttaaaacgcctaaccttggtaaaaaatct
cttactgagattaaagacgtacttgcgtcacgtggtctgtctctgggcatgcgcctagaa
aactggccacctgcatcaatcgctgaagattaa
DBGET
integrated database retrieval system
