Vibrio harveyi: AL538_11690
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Entry
AL538_11690 CDS
T04380
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00220
Arginine biosynthesis
vhr00240
Pyrimidine metabolism
vhr00250
Alanine, aspartate and glutamate metabolism
vhr01100
Metabolic pathways
vhr01110
Biosynthesis of secondary metabolites
vhr01240
Biosynthesis of cofactors
Module
vhr_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AL538_11690 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AL538_11690 (carB)
00220 Arginine biosynthesis
AL538_11690 (carB)
Enzymes [BR:
vhr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AL538_11690 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMF98329
UniProt:
A0A454CTI9
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All DBs
Position
1:2461109..2464342
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AA seq
1077 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKYGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAKG
FAGLNKEELNKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSDT
AYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSREIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLMNTQFAVKNNQVYLIE
VNPRAARTVPFVSKATGAPIAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNIYPEGGRALLSVRAGDKERVVDLA
SKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSTVTSVQELHAKVKASLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagtattcttattcttggtgctggtccgattgttatc
ggtcaggcatgtgagtttgactactctggcgcacaagcgtgtaaagcactgcgtgaagag
ggttaccgagttatcctagtaaactctaaccctgcaaccatcatgactgacccagacatg
gcggatgcaacttacatcgagccaatccaatgggaagtggttcgcaacatcatcgcgaaa
gaaaagccagatgcagtactacctacaatgggtggtcaaactgcattgaactgtgctcta
gacctagagaaatacggcgttctagaagagttcggcgttgagatgattggcgcaacggct
gatgcaatcgacaaagcggaagaccgctctcgtttcgataaagcgatgaagtctatcggt
cttgagtgtccacgtgcggatactgcaaaaacgatggaagaagcttacgctgtactcgat
atggttggcttcccttgtatcatccgtccatcatttactatgggtggtactggtggcggt
atcgcatacaacaaagaagagttcgaagaaatctgtcgtcgtggtctagacctgtcgcca
actaacgaacttctaatcgatgagtctcttattggttggaaagagtacgagatggaagtg
gttcgcgacaaagcggacaactgtatcatcgtatgtgcgattgaaaacttcgatccaatg
ggcatccacacgggtgactcaatcacggttgcaccagcgcaaacactaacagacaaagaa
taccagctaatgcgtaacgcatctctagcagtactgcgtgagattggcgttgaaactggt
ggttctaacgtacagtttggtattaacccgaaagatggccgcatggttatcatcgagatg
aacccacgtgtatctcgctcttctgctctagcatcgaaagcaacaggtttcccaatcgct
aagattgcagcgaaactggctgttggctttacactagacgagctaatgaacgacattact
ggtggcgctacaccagcatcattcgaaccaaccatcgactacgtagtaactaagattcct
cgctttaacttcgagaaatttgcaggtgctaatgaccgtctaacgacgcaaatgaagtca
gttggtgaggtaatggcaattggtcgtaaccaacaagagtcactacaaaaagcacttcgc
ggtttagaagttggcgcgactggttttgacgagatggttgacctagatgcaccagacgca
ctgacgaaaattcgtcatgagctgaaagaagcaggcgcagagcgtatttggtacatcgcg
gatgcattccgtgcgggtatgtcagtcgatggcgtattcaacctaacgcaaatcgaccgc
tggttcctagttcaaatcgaagacattgtgaagcttgagcaagagctaaaagcaaaaggt
ttcgctggtctaaacaaagaagaacttaacaagctgaagcgtaaaggttttgctgatgcg
cgcctatctaagattctaggtgttgcggaaagcgaaatccgtcgtctacgtgaccagtac
gatattcacccagtgtacaagcgtgttgatacgtgtgcggcagagttctcatctgataca
gcttacatgtactcatcttacgatgacgaatgtgaagctaacccaacagacaaagacaag
atcatgattctaggcggtggtccaaaccgtatcggtcaaggtattgaatttgactactgt
tgtgtacacgcatcgctagcactacgtgaagatggctacgaaactatcatggttaactgt
aaccctgagactgtttcaacagactacgatacatctgaccgtttgtacttcgaaccagta
acactggaagacgtactagcaatcgcacgtgttgagaagccaaaaggcgttatcgttcag
tacggtggtcaaacaccacttaaactggctcgtgcacttgaagctgctggcgtgccaatc
atcggtactagccctgatgcaatcgaccgtgcagaagaccgtgagcgtttccaagttgct
gtcgaccgtctaggtcttctacagccagagaacgcgacagtaacgacgatggagcaagcg
gtagagaaatctcgtgaaatcggttacccactggttgtacgtccttcttacgtacttggt
ggtcgtgcgatggaaatcgtatacgacgagcaagacttacgtcgctacttcaacgaagca
gtaagcgtatcaaacgaatctccagtactactagatagcttcctagacgacgcagttgaa
gtcgatatcgatgctatctgtgacggtgagcgtgtggttatcggcggtatcatggagcac
atcgagcaagcgggtgttcactcaggtgactcagcatgttctcttcctgcatacacgcta
agccaagaaatccaagacgtaatgcgtgagcaagttgaaaagctagcgtttgaattgggt
gttcgtggtctgatgaacacgcagttcgcggttaagaacaaccaagtatacctaatcgag
gttaaccctcgtgcagcgcgtacggtaccgttcgtatctaaagcaactggtgcgccaatc
gctaagattgctgcgcgtgtaatggcgggtcaatcgctagagtctcaaggctttacgaaa
gaaatcatcccaccgtactactctgtaaaagaagttgtactgccattcaacaagttccca
ggtgttgatccactgttggggcctgaaatgcgctctactggtgaagttatgggtgttggt
gcgacgtttgcagaagcttacgcgaaagcagaattgggttgtggcaacatttacccagaa
ggtggtcgtgcacttctttctgttcgtgcaggtgacaaagagcgcgttgtggacctagcg
tctaagttgacaaaacttggttaccagttggatgcaacacacggtacagctgtcattctt
ggtgaagcgggcattaacccacgtctagtaaacaaagtacacgaaggtcgccctcacatt
cttgaccgtattaagaacaacgagtacacctacatcgtaaacacggctgctggtcgtcaa
gcgattgaagactctaaagttctgcgtcgcggtgcactagctgagaaagtgaactacacg
acaacactaaacgctgcattcgcaacttgtatggcacacacggcagatgcaaagagcaca
gtaacttcggttcaagagctacacgcaaaagtgaaagctagcctagaagcgtaa
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