Vibrio harveyi: AL538_11840
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Entry
AL538_11840 CDS
T04380
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vhr
Vibrio harveyi
Pathway
vhr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL538_11840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_11840
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AL538_11840
DNA repair and recombination proteins [BR:
vhr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL538_11840
Prokaryotic type
AL538_11840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMF98359
LinkDB
All DBs
Position
1:2501295..2501975
Genome browser
AA seq
226 aa
AA seq
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MNQLPTWHDVIGEEKEQSYFVDTLNFVEAERAAGKAIYPPAKDVFNAFRFTEFKDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQQGVVFLLWGSHAQKKGRFIDRNKH
YVLTAPHPSPLSAHRGFFGSKPFSQANQILSQQGKEVINWHLPMAV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttacccacttggcacgatgtgatcggcgaagagaaagagcagagctacttt
gtcgatactttgaattttgttgaagcagaacgagcggcaggcaaagccatttatccgcca
gcgaaagacgtatttaatgcgtttcgttttaccgagttcaaagacgttaaggtagtgatt
ctggggcaagatccttaccacggtcctaatcaagcgcatggtttgtgtttctctgtgttg
cccggcattaaaacgccaccgtctttggtgaatatgtacaaagagttggcgcaagatatc
gaaggttttcaaattcctcaacatggttttttgcaaagctgggcagagcaaggtgtgttg
ctacttaataccgtattgacggtagagcagggcaaagcacactcgcactcaaaaacgggt
tgggaaacctttactgaccgcgtaattgaagcgattaaccagcatcaacaaggtgtggtg
ttcctgctgtggggctcacacgcgcagaagaaaggtcgctttatcgatcgtaacaaacac
tatgtgttaacggcaccgcatccatcaccgttgtctgctcaccgagggttctttggtagc
aaaccattttcacaagcgaaccagatcctctctcagcaaggcaaagaggtcatcaattgg
cacctaccaatggcggtgtaa
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