KEGG   Vibrio harveyi: AL538_12850
Entry
AL538_12850       CDS       T04380                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vhr  Vibrio harveyi
Pathway
vhr00740  Riboflavin metabolism
vhr01100  Metabolic pathways
vhr01110  Biosynthesis of secondary metabolites
vhr01240  Biosynthesis of cofactors
vhr02024  Quorum sensing
Module
vhr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    AL538_12850 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AL538_12850 (ribD)
Enzymes [BR:vhr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     AL538_12850 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     AL538_12850 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AMF98544
UniProt: A0A454CMQ3
LinkDB
Position
1:2732410..2733534
AA seq 374 aa
MAQQSLSSEFTSQDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEP
HAEVHAMRMAGNKAEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAG
RGFQMLRDAGVDVQVGLLESDAIELNKGFIKFMQTGMPYVQLKMAASLDGQSALNNGQSQ
WITSPKARQDVQRYRALSGAILSTSKTVIDDNASLNVRWDDLPCSVQAQYPQDEVRQPPR
VIFDRQSQLSDDLKLFNTDGERIIVSHDGDIAPELTENGQIDLTATLKAVASEYHINHLW
VEAGATLASSLIKANLVDELIVYLAPKLMGSDGRGLIGALGLTDMAQVIDLTITDVRMVG
VDIRITATVKRNQS
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggctcaacaatctctctcttcagaatttacctctcaagatttcgaaatgatgtcgcgt
gcgctcaagttagcgaagcgcggcatttatacaacggcacctaacccgaatgtaggctgc
gttattgtccgtgacggtgagattgttggcgaaggtcatcaccatcgtgcgggggaacct
catgctgaagttcacgcgatgcgtatggctggcaataaagctgaaggcgcaacggcatat
gtgacactggaaccttgctctcattatggtcgtacaccaccttgtgcagaggggctaatc
aaagccaaagtcgcacgtgttgtttgtgcaatggaagatccaaacccgaaagttgcagga
cgcggttttcaaatgctgcgcgatgcgggggtagacgttcaagttggcttattagaaagc
gatgcgatcgagctgaacaaagggtttatcaagttcatgcaaactggcatgccttatgtt
cagttgaaaatggcagccagcctcgatgggcaaagtgcactcaataatggtcagagtcaa
tggatcacctccccaaaggctcgccaagatgtacagcgttatcgagcgttgagtggcgct
attctctctaccagtaagacagtcattgatgacaatgcatcgctgaatgtgcgttgggat
gacctgccatgcagtgtgcaagctcaatatcctcaagatgaagttcgtcagcctcctcgt
gtgattttcgatcgccagtctcaacttagcgatgatctaaaactatttaatactgacggt
gagcgtattattgttagtcacgacggcgatattgcgcctgagctgacggaaaatggtcaa
attgacttaacggcgacattaaaagctgtggcgagcgaatatcatattaatcacttgtgg
gttgaagctggcgctacactcgcgagttcattaatcaaagctaaccttgtagatgaactg
attgtttatcttgctcctaaattaatgggcagcgatgggcgaggtttgattggtgctctt
gggctaaccgatatggcacaagttatcgatttaactattaccgacgttcgaatggtaggg
gtggatattcgcattaccgcaaccgtcaaacgcaaccaaagctag

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