Vibrio harveyi: AL538_13035
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Entry
AL538_13035 CDS
T04380
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00260
Glycine, serine and threonine metabolism
vhr00460
Cyanoamino acid metabolism
vhr00630
Glyoxylate and dicarboxylate metabolism
vhr00670
One carbon pool by folate
vhr00680
Methane metabolism
vhr01100
Metabolic pathways
vhr01110
Biosynthesis of secondary metabolites
vhr01120
Microbial metabolism in diverse environments
vhr01200
Carbon metabolism
vhr01230
Biosynthesis of amino acids
vhr01240
Biosynthesis of cofactors
vhr04981
Folate transport and metabolism
Module
vhr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL538_13035 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AL538_13035 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AL538_13035 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AL538_13035 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AL538_13035 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AL538_13035 (glyA)
Enzymes [BR:
vhr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AL538_13035 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AMF98581
UniProt:
K5W061
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All DBs
Position
1:2773708..2774958
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQANVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEDDAKELANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagagactcttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagt
ccacgtgtaatggaagctcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagctgaagcactagcgatcgat
cgtgcatgccaactatttggttgtgagtacgcgaacgtacagcctcactcaggttctcaa
gcaaacagcgcagtttacatggcgcttctgaacccaggcgacacagttctaggtatgagc
ctagcgcacggtggtcacctaactcacggttcaccagtaaacttctctggtaagcactac
aacgttattccttacggtatcgacgaagcaggtcaaatcaactacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttttctgcttactcgcaaatc
gttgattggaaacgcatgcgtgaaatcgcagacaaagttgatgcttacctattcgtagac
atggcacacgttgctggtctaatcgcagcaggcgagtacccgactccagttccacacgct
cacgttgtgacaacaacgacgcacaaaacgctagcgggtcctcgtggtggtcttatcctt
tctaacgaaggtgaagagctgtacaagaagctgaactcagcggtattccctggcggtcaa
ggtggtcctctaatgcacgttattgctggtaaagctgtagcgttcaaagaagcgatggaa
cctgaattcaaagcttaccaagctaacgtagtgaaaaacgcgaaagcaatggttggtcaa
ttccaagagcgtggttacaaaatcgtatctaacggtactgagaaccacctattcctagtt
gacctaatcgacaaagacattacaggtaaagatgcagatgcagcactaggtgcagcaaac
atcacagtaaacaagaactcggttccaaacgacccacgcagcccattcgtaacgtctggt
atccgtgttggtacgccagcaattactcgccgcggcttcactgaagatgacgcgaaagag
ctagcaaactggatgtgtgatgttctagataacatcggcaacgaggaagttatcgaagcg
acgaagcagaaagttctagagatctgtaagcgtctaccagtttacgcatag
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