Vibrio harveyi: AL538_13070
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Entry
AL538_13070 CDS
T04380
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00550
Peptidoglycan biosynthesis
vhr01100
Metabolic pathways
vhr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AL538_13070 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AL538_13070 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
AL538_13070 (mrdA)
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AL538_13070 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AL538_13070 (mrdA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AUW38295
UniProt:
A0A3A1Q150
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Position
1:complement(2780899..2782824)
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AA seq
641 aa
AA seq
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MIRKRRSQIRDYQAEARLFSSRAIVAFIGIVILMGLLVANMYNIQVNQFQDYKTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKIKDIDGTIKELQTILEITPEQIER
FQRERKRTRRFKSVPLLTQLDENQVAVFSVNQYRFPGVEISATLKRYYPFSEVLTHVIGY
VSRINDRDMQRLVREEKDANYQATRDIGKLGIEKYYEDLLHGTAGYQEVEVNSRGRVIRT
LKYVPPVPGKDIVLNLDINLQLYVHQLLDGRRGSAVVLDPRDNGVLAMVSSPSYDPNAFV
HGISGKAYRALLNDKNRPLVNRTTLGIYPPASTIKPFIAVAALEEGVVTPKTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVDIIKSIEESVDTFFYQIAYDMGIDRLSNWMMMFGFGDYT
GIDIYEESKANMPTREWKMARHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNEGA
VTAPHLLKATIDNGGDFEEQESSEYETYPPIQNVPDKYWNMAKEGMRLVNHGPKGTARRS
FYNMDYQTGGKSGTAQVFGLAEDEEYNADEVAEHLRDHALFTGFAPFDDPKVVVSVVLEN
AGGGSSNGAPVVRKIFDRVILGPEKIESDEEQNNAKKEVAQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtaaacgccgcagtcaaattcgagattaccaagcagaagcgcgtctattttct
agtcgcgctattgttgcatttataggtatcgtaattttgatgggcttgctggttgccaac
atgtacaacattcaggtaaaccagttccaagactataaaacccgttctaatgacaaccgc
attaaagtggttcctattgcaccaaaccgtggtttgatctacgaccgcaatggtgttctg
ctcgctgaaaaccgccccgtctttaacctggaactgaccccagaaaaaatcaaagacatt
gacggcaccatcaaagagctacaaaccatccttgaaatcacaccagagcaaatcgaacgc
ttccaacgtgagcgtaagcgtactcgtcgcttcaagtcagttccgttgttgactcaattg
gatgaaaaccaagttgcggttttctctgtcaatcaataccgtttcccgggcgttgagatt
agcgctacgctaaagcgttactacccattcagcgaagtactgacccatgtgattggctat
gtttctcgtattaacgaccgcgacatgcagcgcttagtgcgcgaagaaaaagacgccaac
taccaagcaactcgtgacatcggtaagttaggtatcgagaagtactacgaggacctattg
cacggtacggcgggttaccaagaagtggaagtaaacagccgcggacgtgtcattcgtact
ttgaaatacgttccacctgtgccaggtaaagacatcgtcttaaacctcgatatcaaccta
cagctctatgtgcatcagttattagatggacgtcgtggtagcgcggtagtgctcgaccct
cgagacaatggtgtattggctatggtttctagcccaagctacgatccaaatgcgttcgta
cacgggatctcaggtaaagcataccgagcactattaaacgataaaaaccgtccattggtg
aaccgcacaacgcttggcatttacccaccagcttcaaccatcaaacccttcattgctgta
gcggctctggaagaaggtgttgtgacaccgaaaaccacccgaaacgatcctggttactgg
cgaattccaaattcagatactcgtccattccgtgactggctacgttggggtcatggtcgc
gtcgacatcatcaaatcaattgaagaatccgtcgataccttcttctaccaaattgcctac
gacatgggcattgatcgcctatcgaattggatgatgatgtttggttttggcgattatacg
ggcatcgacatttacgaagaaagtaaggcaaatatgccaactcgtgaatggaaaatggct
cgtcataaaacaccttggtacaagggcgatactatccctgttggtattgggcaaggttac
tggacagcaacaccaatgcagatagcgaaagcgacctcagtattggttaacgaaggcgct
gtaacagcacctcacttgctaaaagcaaccatcgacaacggtggcgactttgaggagcaa
gaaagctctgaatacgaaacctaccctcctatccaaaatgtgccagacaaatactggaat
atggcgaaggaaggcatgcgtttggttaaccacggtccaaaaggtactgctcgtcgctct
ttctataatatggattaccaaactggtggtaagtcagggaccgctcaggtatttggtctt
gcagaagacgaagagtacaacgcagatgaagtcgcagaacacttacgtgaccacgcgttg
tttaccggttttgcgccatttgatgatccaaaagtcgtcgtatcagtggtactggaaaac
gcaggtggtggttcaagtaacggcgcgcctgttgtgagaaagatcttcgaccgtgtcatc
cttggtcctgaaaaaatcgagtcagatgaagaacaaaacaatgcgaagaaagaggtagcg
cagtga
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