Vibrio harveyi: AL538_13125
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Entry
AL538_13125 CDS
T04380
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vhr03016
]
AL538_13125
Enzymes [BR:
vhr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AL538_13125
Transfer RNA biogenesis [BR:
vhr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AL538_13125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AMF98598
UniProt:
K5VNL7
LinkDB
All DBs
Position
1:complement(2792945..2794369)
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AA seq
474 aa
AA seq
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MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPEMIKQSQS
DEAPVMDISFPEIEKFDRLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLADQGVREVNLLGQNVNAYRGPMHDGEICSFAELLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRVLTMMKRPHTGIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDLSEQVKKE
RLYELQQTVNAQAMRYSRLMLGTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIG
QFVDVKITDVFANSLRGELVRTEKDMDLRSVISPTQMMAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgacctgcttaatgctgcaaacggctatgagctgaccgaagagccagaggaa
gcagacgtacttctacttaacacctgttcgatccgtgaaaaagcgcaagagaaagttttc
caccagcttggtcgttggaagacactaaaagataaaaaacctggcgtagttatcggcgta
ggtggttgtgtagcaactcaagaaggtgatcacatccgtcagcgtgctccatacgttgac
gtaatttttggtccacaaactcttcaccgtcttcctgagatgattaaacaatctcaatcg
gatgaagcaccagtaatggacatttcattcccagaaatcgaaaagtttgaccgtctacca
gagcctcgtgctgaaggtgcaacggcattcgtttctattatggaaggctgttctaagtac
tgtacttactgtgtagtaccgtacactcgtggtgaagaagtaagccgtccaatggatgac
gtactgttcgaaatcgcacaactagcagatcaaggcgtacgtgaagtaaacctactaggt
caaaacgtaaacgcgtaccgtggtcctatgcacgacggtgagatctgttcatttgcagaa
ctgcttcgtttggttgcgtctatcgatggtattgatcgtatccgctttacaacaagccac
ccattagagtttactgatgacatcatcgcagtatacgaagacacacctgagctagtaagc
ttccttcacctaccggtacaaagtggtagtgaccgagtgctgactatgatgaaacgtcct
cacactgggattgagtacaagtcgatcatccgtaaactgcgtaaagcacgtcctgatatc
caaatcagttcagactttatcgttggtttccctggtgaaacagacaaagatttccaagac
acaatgaagctaatcaaagacgtagactttgacatgagcttcagcttcatcttctctcca
cgtccaggtacgccagcggcagactacccttgtgacctatcagagcaagtgaagaaagag
cgtctatacgagctacaacaaaccgtaaatgcacaagcaatgcgctactctcgtctaatg
ctaggcactgagcaacgcgttctggttgaaggtccttctaagaagaacctaatggagcta
cgcgctcgtacagaaaacaaccgtgtagtaaactttgaaggtagcgcagacctaattggt
caattcgttgacgtgaagattacggatgtatttgctaactcgctacgtggtgagctagta
cgtacagaaaaagacatggaccttcgtagtgtgatttcaccaacgcaaatgatggcgaaa
acacgtcgcgaagatgagctaggtgtagctacttttacgccataa
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