Vibrio harveyi: AL538_13865
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Entry
AL538_13865 CDS
T04380
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00061
Fatty acid biosynthesis
vhr00071
Fatty acid degradation
vhr01100
Metabolic pathways
vhr01212
Fatty acid metabolism
vhr02024
Quorum sensing
vhr04146
Peroxisome
Module
vhr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AL538_13865
00071 Fatty acid degradation
AL538_13865
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AL538_13865
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL538_13865
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vhr01004
]
AL538_13865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vhr04147
]
AL538_13865
Enzymes [BR:
vhr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AL538_13865
Lipid biosynthesis proteins [BR:
vhr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AL538_13865
Exosome [BR:
vhr04147
]
Exosomal proteins
Exosomal proteins of breast milk
AL538_13865
Exosomal proteins of breast cancer cells
AL538_13865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMF98720
LinkDB
All DBs
Position
1:2930650..2932341
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AA seq
563 aa
AA seq
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MDKPWLSRYPSDVPETINPEQYESLVEMFEQSVQKYADQPAFMNMGSVMTFRKLEERSRA
FAAYLQNELKLKKGDRVALMMPNLLQYPVALFGILRAGCIAVNVNPLYTPRELEHQLNDA
GATAIVIVSNFANTLEQIVENTPVKHVVLTSLGQMLPRAKGTLVDFVVKYVKGMVPKYDL
PGAISMRKALHKGRRLQYVKPFMSGDDIAFLQYTGGTTGVAKGAILTHRNMIANVMQAKG
AYGPVLSPGRELVVTALPLYHVFALTVNCLLFVEMGGNNLLITNPRDIPGFVKELQKYQF
TAITGVNTLFNALVNNEDFHELDFRNLRLAVGGGMAVQRAVAEKWQKTTGCYLLEGYGLT
ECSPLVAAYPHDLVEYNGSIGLPVPSTEVRIVDEEGNALANTETGELQVRGPQVMQGYWQ
RPEATKEVINEDGWLSTGDIVKFDDEGFLHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKDEVIAHCRQHLTGYKVPKLVEFREDLPKT
NVGKILRRVLREENDAELAKKSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccatggctttcacgttatccaagtgacgtacctgaaaccattaatccagag
caatatgagtctttggtagaaatgttcgagcagtctgttcaaaaatacgcagaccagccg
gcattcatgaacatgggctcggtcatgaccttccgcaaattggaagagcgtagccgcgca
ttcgccgcatacctacaaaacgaacttaagctgaagaagggcgaccgagttgctcttatg
atgccaaatctgcttcaataccctgtcgcgctatttggtattttgcgtgcaggctgtatc
gctgtgaacgtgaacccactttacactcctcgtgagcttgagcaccagctaaacgatgct
ggcgcaacagcgatcgttatcgtttctaatttcgcgaacacactagagcaaatcgtagaa
aacacgccagtgaaacacgtggttctgaccagccttggtcaaatgttgccacgtgcaaaa
ggtacgcttgtcgacttcgtggttaagtacgtgaagggcatggtgcctaagtacgatcta
ccgggtgcaatctcaatgcgtaaagcgctgcacaaaggtcgtcgtcttcagtacgtgaaa
ccatttatgtctggcgatgatatcgcattcctacagtacactggtggtacaacgggcgta
gcgaaaggcgcaatcctgacgcaccgcaacatgatcgctaacgtaatgcaggcgaaaggt
gcttatggtcctgtattgtctccgggtcgcgagcttgttgttacggcgctgccgctttac
cacgtattcgcgctgacggtgaactgtctactgttcgttgagatgggtggtaacaacctg
cttatcactaacccgcgtgatattccgggctttgtgaaagagctgcaaaaataccagttc
actgcgattactggcgtaaacacgctgtttaatgcactagtgaacaacgaagacttccat
gagctagatttcagaaaccttcgcctagcagtaggtggtggtatggcagtgcaacgtgcc
gtcgctgaaaaatggcaaaagaccacaggctgttacctactagaaggttacggtctaaca
gaatgttctccattggtggcggcttacccgcacgacctagtggaatacaacggttctatc
ggtctgcctgtgccatcaactgaagtacgtattgttgatgaagaaggtaacgcactagca
aatactgagacaggtgagcttcaagttcgcggtcctcaagtgatgcaaggttactggcag
cgtccagaagcgactaaagaagtgatcaacgaagacggttggctatcgacgggtgacatc
gttaagtttgatgatgaaggtttcctacacattgttgatcgtaagaaagacatgattctt
gtgtctggctttaacgtttacccgaacgaaatcgaagacgtggttgctctacacggtaaa
gtgttagaagtcgcggcaatcggtcagcctcacgaagtgtctggtgagttggtgaagatc
tacgttgtaaaacgcgatccgagcctaaccaaagatgaagtgattgcacactgtcgccaa
cacctaactggctacaaagtgccgaagttggttgagttccgtgaagatctacctaagacc
aacgtaggtaagatccttcgtcgcgtactgcgtgaagagaacgatgcagagctagcgaag
aagagcgcataa
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