KEGG   Vibrio harveyi: AL538_14265
Entry
AL538_14265       CDS       T04380                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
vhr  Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vhr03032]
    AL538_14265
   03036 Chromosome and associated proteins [BR:vhr03036]
    AL538_14265
   03400 DNA repair and recombination proteins [BR:vhr03400]
    AL538_14265
DNA replication proteins [BR:vhr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AL538_14265
Chromosome and associated proteins [BR:vhr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AL538_14265
DNA repair and recombination proteins [BR:vhr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AL538_14265
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 ACP_syn_III_C Arteri_nsp7a DUF7342 GTP_EFTU_D2 HU-CCDC81_euk_1 VWA_2 Nup214_FG HU-DNA_bdg
Other DBs
NCBI-ProteinID: AMF98795
UniProt: A0A0B4IPI1
LinkDB
Position
1:3028578..3028850
AA seq 90 aa
MNKTQLVEQIAENADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPSFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaaactcaactagtagaacaaatcgcagaaaacgcagacatctctaaagcatca
gctggtcgcgctctagacgcattcatcgaagcagttagtggtacgcttcagtctggtgac
caagttgctcttgttggcttcggtacattcagcgtacgtactcgtgcagcacgcacaggt
cgtaacccaaaaactggtgaagaaatccaaatcgcagaagctaaagtaccttctttcaaa
gctggtaaagctctaaaagacgcttgtaactaa

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