Vibrio harveyi: AL538_14465
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Entry
AL538_14465 CDS
T04380
Name
(GenBank) GGDEF domain-containing protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vhr
Vibrio harveyi
Pathway
vhr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL538_14465
Enzymes [BR:
vhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
AL538_14465
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
STAR_dimer
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
AMF98827
LinkDB
All DBs
Position
1:3068358..3070355
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AA seq
665 aa
AA seq
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MVKVVQRLLVFACFLLSLSLKAEPEQAPNYKVATEADDVVTRVLFDAVAEHFGVSIQYVN
YSSFDAILDSVANGESDFAANITYTSERALKFSYSRPTNIEYTYLYGLNDATLGEASVVG
VPKDTIYAELIQQNYPELLQVPYQGHEEAVALLRSGQVDGVVDAINQLKPMLLEGFDAKL
LNDQISIKPVSIVSQKGSHLDELSTFANFIHDESVQKHLREQVALYQFELRQTALRESIK
RLPIDLEQPLTIKFESIFPYVVYKEDGSIEGMTADVVMKSCKILALNCVVISKPDESWES
MYAQFIKGEFDLLAPLTISRERRAFSYFPQPHYQPTSVMVKRLGYKPNVYSHVSQLISER
IGVVKDDFFDQMLTQMLPLKELKRFDSQQATLDALLAREIDYIAMDTAMLNHFLRLSELI
PIEQDDAIGEFYESELSIGLTTNQRGEILAPYFSRAISMLDLEKIVAQYDLRPDWRTALE
YEVRLATQTQAVFVFVLVFAVGVSLYLYRQSNTDNLTGLRNRRSLQLKYRQGVPKDLAVL
YLDINHFKQINDTFGHRAGDKVLQLLSLKIHRVWAGRSYRIGGDEFILLGYPTEVQLSRA
VEELSSLDVKDEQSDGLNVVTISVGVSAKRERSVSLEQALHLADEDMYSSKQASRNCNEA
NPCMV
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagtagttcaaaggctgttggtttttgcttgctttctattgagtttgagcctc
aaagcagaaccggaacaagcccctaattataaggtagcgacagaggcggatgatgtcgtt
actcgcgtgttatttgacgcagtagcagaacattttggtgtttcgatccagtacgtgaat
tactcgagtttcgacgctattttggattctgttgcgaatggtgagagcgactttgctgcg
aatatcacctacacctcagaacgtgcactgaagttcagttattcacgtccaactaacatt
gaatatacttatctgtatggtttgaatgacgcgaccttaggtgaagcgagtgttgttggg
gtaccaaaagacaccatctatgcagagcttattcaacaaaactaccctgagttgcttcaa
gttccttatcaagggcatgaagaagcggtggcactgctacgttctggtcaagttgatggg
gtagtagatgctatcaatcaactcaaacctatgttgctagaaggctttgatgccaaactt
cttaatgaccaaatctccatcaagcctgtttctattgttagccagaaaggatcacatctt
gatgagttgtcgacgtttgccaattttattcacgatgaatcggtacaaaagcatttacgc
gaacaagttgcgctatatcagtttgaacttcgacagacagcattgcgtgaatctatcaaa
cgactgccaatcgatttagagcagcctcttactatcaagtttgaatccatctttccttac
gtggtttataaagaggacggctctatcgaagggatgacagcagacgtcgtaatgaaaagc
tgtaaaattttggctttgaattgtgtggttatcagcaagcctgatgaaagttgggagtcc
atgtacgcccaatttatcaaaggtgaattcgatttattagcgccactgaccatcagtcga
gaacgacgtgctttcagttacttccctcaacctcattaccaaccaacgtcggttatggtg
aaacgcttgggctacaagcccaacgtatattcccatgtttctcagcttatttctgaacgt
attggtgtggtaaaagatgacttttttgatcaaatgcttacccaaatgctgccattaaaa
gaactcaagcgatttgattctcagcaagcaacattagatgccttgttagccagagagatt
gattacattgcgatggacaccgctatgctgaatcatttcttacgtttgagtgagttaatt
ccaattgaacaagacgatgcgattggtgagttttacgaatcggaattgtcgatagggtta
acaaccaatcagcgtggtgaaattctcgccccatactttagtcgagcaatctccatgcta
gatttggagaaaattgttgctcagtatgacttaagaccagattggcgaaccgccttagaa
tatgaagttcgtttggcgacgcagactcaagctgtgtttgtttttgtgctggtgtttgcg
gttggtgtcagcttgtacctataccgtcaatcaaacactgacaacttgactggattgaga
aatcgacgctcgttacaacttaagtaccgacagggtgtaccaaaggatcttgcggtcttg
tatctcgatattaaccacttcaagcaaatcaacgatacgtttggacatcgagcaggggat
aaagtgttgcaattgctgtcgctcaaaatacatcgtgtgtgggcgggtagaagttatcgt
attggtggtgatgagtttattttgcttggctatcctactgaggttcagttaagtcgagcg
gttgaagaactgagttcactggatgtcaaagacgaacaatctgatggtttgaatgtggta
accatttctgtgggtgtttccgccaagcgagagcgaagcgttagtcttgagcaagcgctg
catttagcagatgaagatatgtactcgagcaaacaagcttcccggaattgtaatgaagca
aacccttgtatggtttag
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