Vibrio harveyi: AL538_16195
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Entry
AL538_16195 CDS
T04380
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_16195
DNA repair and recombination proteins [BR:
vhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AL538_16195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
DZR
DUF7577
zf-tcix
ERCC3_RAD25_C
DUF6134
AAA_30
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AMF99153
UniProt:
A0A3A1PVG4
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All DBs
Position
1:complement(3460798..3462549)
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AA seq
583 aa
AA seq
DB search
MYTLRPYQADSVKAVIHYFRKHTTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFKNQFSLLVIDECHR
VPDEKTSSYQKVITHLRELNPGIKVLGLTATPYRLGMGWIYQYHTRGQVRTEESRFFRDC
IFELPIRYLLDENFLTPARMMDAPVLSYDFSQLKPANTGRYKEAEMDMVIDKAKRATPQI
VEQIIQYAKERKGVMVFAATVRHAQEIHGLLPEGETAIVIGDTPTPERDAIIQSFKNREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSEGKSECLVLDYAGNSY
DLYQPEVGDPKPDSTSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDETG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALIFECTEMD
LSVFKSSDGKSQLKVTYSGETYQGEGNALVHEFWSLNTKKQKQIFKDQFVRPHLADKHRP
FEEASPTRVVANQHRFRLPQFVIARKSGRFWKLRDKIFDDELR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacacccttcgaccataccaagccgactctgttaaagcggtgattcactattttcgt
aaacacaccacaccagcagtcattgtgctgcctacaggtgcaggtaaaagcttggtcatt
gcagagctagcaagacttgccaaagggcgcgtcctagtacttgctcatgtaaaagagctg
gtggaacagaaccacgctaagtacgaaggctatggactgaaaggctcaatattctcagcg
ggtcttggacgtaaagaaaccgatcagcaagtggtgtttgcttctgtacaatcagtagtg
cgcaatctggactctttcaagaatcaattttccttgttagtgattgatgaatgccatcgc
gtgccagacgaaaaaaccagtagctaccaaaaagtaatcacgcacctaagagaactcaac
ccaggcattaaagttttggggttaaccgcaaccccataccgcttaggcatgggctggatc
tatcagtatcacacccgtggacaagttcgcacggaagagtcacgctttttccgtgactgt
atcttcgaactccctatccgttacttactggatgaaaacttcttaacaccagctcgcatg
atggacgcgccagtcctatcttatgacttctcacaactcaaaccagcaaacacaggtcga
tacaaagaagctgagatggacatggtgatcgacaaagctaagcgagcgacaccacagatc
gttgaacaaatcattcaatacgccaaagaacgcaaaggcgtaatggtatttgcagctaca
gttcgccatgcacaagaaatccatggtttattgcctgaaggcgaaaccgcgattgtgatt
ggtgacacgccaacaccagagcgcgatgccattattcagtcgttcaagaatcgtgagata
aagtacttggttaacgtgtccgttttaaccacgggcttcgatgcaccacatgtggattta
atcgcgattctgcgcccaaccgagtcggtcagcttgtatcagcaaattgttggtcgtggt
ttgcgtctgtcggaaggcaaatcagaatgtctcgtactggattacgctggcaacagctat
gatttatatcagcctgaagtgggcgatccgaagccagattccactagcgaaatcatcacc
atcccttgccccgcttgcggctttaataacaacttctggggaaaactggatagcaatggc
tttttgctggagcactttggtcgtcgttgccaaggatattttgaggacgatgagaccgga
gaacgtgagcattgcggttatcgatttagagctaaatattgcggcgagtgtggcgctgat
aacgacattgcagcgcgtatttgtcatgagtgtgatgccacgctggttgatccagacaaa
aagctcaaggaagcattgaacctaaaagatgcgctgatctttgaatgtaccgaaatggac
ttgtcagtatttaagtccagtgatggcaaatcacagttgaaagtgacgtattccggtgaa
acctatcaaggagaaggaaatgcattggttcacgaattctggtcactgaataccaaaaaa
cagaagcaaatcttcaaagaccagtttgtacgccctcaccttgctgacaaacatcgtcca
tttgaagaggcgtcgccaaccagagtcgtggcaaaccagcatcgtttccgtctgccacaa
ttcgtgattgctagaaagtcagggcgtttttggaaactgcgcgataagatctttgacgac
gaactaagataa
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