KEGG   Vibrio harveyi: AL538_16950
Entry
AL538_16950       CDS       T04380                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vhr  Vibrio harveyi
Pathway
vhr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL538_16950 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vhr02044]
    AL538_16950 (clpV)
Secretion system [BR:vhr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL538_16950 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N ClpB_D2-small nSTAND3 AAA_22 AAA_33 NBD_SMAX1 AAA_16 Zeta_toxin AAA_7 RNA_helicase AAA_18 TniB RuvB_N Torsin TIP49 Sigma54_activat NACHT SRP54 Rad17 Hpr_kinase_C
Other DBs
NCBI-ProteinID: AMF99297
UniProt: A0ABM5Y137
LinkDB
Position
1:complement(3648573..3651179)
AA seq 868 aa
MTQVTLTNLVAKLSPELKRALEASAGAAMNQGVAAIEPEHWLLTLMNQQDAHLKTLIESQ
KINQDQLASELANRIERLPKVQDSQPTLSHALTELLKDAWMIASVNYGHGEIISLHLVQA
LLQQNVMGVSSNNLESLQNVSTESLQGLINITPVKRATQQSTGEASSAANTASANDALSK
YTINLTQQAIEGNIDPISGRNSEVRKAIDILCRKRQNNPIFVGEPGVGKTAVVEGLALRI
AADEVPSALQGVQLHSLDLGLLQAGASVKGEFENRLKDVINEVKHSDVPIIVFIDEAHTL
IGAGGAAGQNDAANLLKPALARGEFKTIAATTWAEYKKYFEKDPALTRRFQVVTVEEPNA
EDAKQMLRGIAASLQKHHGAFITESAIDAAVNLSIRYLPSRQLPDKAISLLDTASARIAL
TQGAKPEVIEALEQTIRYQQNEQSALEKEFDLFGTGAEEIAELKQEITTNQSQLADYQTR
WEQEITLVDEIKALQQSITESETLDEAQQTQLNALLDQLHELQGEEPLVNAMVDDSTIAQ
VISGWTGIPVGSMMSDEIARLLSLESELDKRVIGQNVAKQELAKAIRISRAGLTDNRKPI
GVFLMCGPSGVGKTETAMALAEQLYGCSNDLTVINMTEFKEEHKISMLLGSPAGYVGFGE
GGVLTEAIRRNPYSVLLLDEMEKAHPGVHDLFYQIFDKGHIKDSEGRMVDFKNTLIIMTS
NAADQAICDVCDENAERISNDELLEAIRPDLQRYFKPAFLGRTTIVPYYPLNDDELAKIT
EIALNRIRKKLAEQYQASFTWDAGFVDLVVSKNTDPTTGGRAVEQIINRSLMPKLAEECI
ARLSTQQPISQVTVTAASTPQGFELDIQ
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgacacaagtaacgctgacaaatttagtcgccaagttatcgccagagttaaaacgcgca
ttggaagcctctgcgggtgcagctatgaaccaaggcgttgctgccattgagccagaacat
tggttgctcacgctaatgaatcaacaagacgcgcacttaaaaactctgattgaaagtcag
aagatcaaccaagatcaacttgccagtgaactagcaaatcgcatcgagcgcttaccaaaa
gtacaagacagccaaccaacgctcagccatgcactgactgaacttctaaaagacgcttgg
atgattgcctccgttaactatggacatggtgaaatcatcagcttgcatcttgttcaagcg
ctgttgcagcagaacgtcatgggcgtatcgagcaacaatctcgaatcactacagaacgtg
tcgaccgagtccctgcaaggtttaatcaacataacgccggttaagcgagcaacgcaacaa
agcacaggtgaagcaagttcagccgcaaatacagcaagcgcgaacgacgcattaagtaag
tacaccatcaacctgactcaacaagcgattgaaggcaatatcgacccgatttctgggcgt
aattctgaagtgagaaaagccatcgacattctttgtcgtaaacgccagaacaaccctatt
ttcgttggtgagccgggcgtgggtaaaaccgctgtcgttgaaggcttagcgctaagaatt
gcagcagatgaagtaccaagtgcgctgcaaggcgttcaactccattcgcttgatttaggg
ctattacaagcaggcgcgagcgtaaaaggtgaatttgaaaatcgcctgaaagacgtcatc
aacgaagtgaaacacagcgatgtgccaatcattgtatttattgacgaagcacatacgctt
atcggggctggtggtgcagcaggacaaaatgatgctgccaacttattgaaaccggctctt
gcgcgtggtgagttcaaaaccattgccgcaacaacatgggcagagtacaaaaagtacttc
gagaaagatcctgctttgacccgccgcttccaagtcgtcacggtagaagagccaaatgca
gaagatgccaaacagatgctgcgaggcattgcggcttcattgcaaaagcaccacggcgcg
tttattacagaatccgcgatcgatgccgcggtcaacctatccattcgctacttaccctct
cgccaattgccagataaagcgatcagcctgctcgataccgctagtgcgcgtattgcttta
acccaaggtgcaaaaccagaagtgattgaagcgttagagcaaaccattcgctatcaacaa
aacgagcagtcagctttagagaaagagtttgatttattcggcacaggcgcagaggaaatt
gccgaattgaagcaagaaatcaccaccaatcaatctcaattagcggactaccaaacgcgt
tgggagcaagagattacattggttgatgagattaaagcgctacaacaaagcatcacagaa
agcgaaacgctggacgaagctcagcaaacccaattgaatgcccttctcgaccaattgcac
gagcttcaaggcgaagagccgttagttaatgcaatggtggatgattcgaccatcgctcaa
gtcatttccggttggacaggcattcccgttggcagcatgatgagtgacgaaatcgctcgc
ctattgtcactagaatctgagctggataaacgcgttatcggtcaaaacgtggcgaaacaa
gaactggcaaaagcgattcgaatctcacgcgctggcttgaccgacaatcgcaagccaatc
ggtgtgttcttgatgtgtggtccaagtggtgtcggtaaaacggaaactgctatggcgctc
gcggagcagctttacggatgcagcaacgatctcacggttatcaacatgaccgagtttaaa
gaagaacacaaaatctcaatgttacttggctcgcctgctggttatgttggttttggtgaa
ggtggcgtgttaaccgaggcgattcgccgcaatccctactctgtcttgcttttggatgag
atggaaaaagcgcatccgggcgttcatgacctcttctatcaaatcttcgataaaggacac
atcaaagacagcgaaggtcgcatggtcgatttcaaaaacaccttaatcatcatgacttct
aacgccgcagaccaagcgatttgcgatgtgtgtgatgaaaacgccgaacgcatcagcaac
gatgaactgctcgaagcaattcgtcccgatctacaacgttacttcaaacctgcgttctta
gggcgtaccaccatagtgccttattacccactcaacgatgatgagttggcgaagatcacc
gaaatcgcgctaaaccgcattcgcaaaaaactggcagaacagtatcaagcgagctttacg
tgggatgcaggttttgtggatttggttgtcagcaaaaataccgaccctacgacaggtggt
cgcgcggttgagcaaatcattaaccgttctttgatgccgaagttggcagaagaatgcatc
gcgcgcctaagtacacagcaaccgattagccaagtgacggtcaccgcagcgtctacgcca
cagggctttgaactggatattcagtag

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