Vibrio harveyi: AL538_17335
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Entry
AL538_17335 CDS
T04380
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vhr
Vibrio harveyi
Pathway
vhr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
AL538_17335
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vhr01002
]
AL538_17335
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
AL538_17335
Peptidases and inhibitors [BR:
vhr01002
]
Cysteine peptidases
Family C82
AL538_17335
Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AL538_17335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
DUF3606
Motif
Other DBs
NCBI-ProteinID:
AMG01380
LinkDB
All DBs
Position
2:complement(42496..43422)
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AA seq
308 aa
AA seq
DB search
MPSKKRPMSIAKRTLLSVSLSLVSSLSFAKMYQLPEDGARVIGRMENHVVEQGETMANIA
KRYDVGMLALMAANKGVDPFLPQDGHVLTIPTQLILPDVPHKGIVINLAELRLYYFPENE
NVVHVFPVGIGRIGRDTPEMTTSISQKRPNPTWTPPSSIRAEYKAKGIDLPAVVPAGPDN
PLGMFALRLAYGHGEYLIHGTNKDFGIGMRVSAGCIRMDPRDIEWLFDKVRRGEKVKIIN
QPVKVALEPDRSVFVEAHEPLTRSNGEKDHLVIPKELDWWLDEFGMTNAKAKAAIAAQNG
VPVEITAP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcaagaagcgtccaatgagtatcgctaaaagaaccctgttgtctgtatcgttg
tctttagtgagtagtttgtcattcgctaaaatgtaccaactaccagaggacggagctcgc
gttataggtcgcatggaaaaccatgtggttgaacaaggcgaaaccatggcgaatattgcg
aagcgatatgatgttggcatgcttgcgctaatggctgcaaacaaaggggttgacccgttt
ctccctcaagatggtcacgttttaacgattcctactcagcttattcttcctgatgtccct
cataaaggtattgtcattaaccttgccgaattgcgactttactatttcccagaaaacgaa
aacgtggttcatgtttttcctgtaggtataggtcgaattggtcgagacactccagaaatg
accacaagtatcagtcaaaagcgtcctaatccgacttggacgccaccttcctctattcgt
gcagagtacaaagcaaaggggattgacctacctgctgtcgttcctgctggaccagataac
ccactaggtatgtttgcacttcgtttggcatatgggcatggtgaatacttgatccacggc
accaataaagattttggtattggtatgcgtgtgagtgcgggttgtattcgtatggaccca
agagacatcgaatggttatttgataaagtacgtcgtggcgaaaaagtaaaaatcatcaat
caaccggttaaagtcgcattagaaccagatcgtagtgtgtttgttgaagcccacgagccg
ttaactcgcagcaatggcgagaaagatcacttagtcattccaaaagaattggactggtgg
cttgatgagtttggtatgacgaatgctaaagcgaaagcagcgattgctgcgcagaatggt
gttccagttgaaataaccgcgccttaa
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