Vibrio harveyi: AL538_18185
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Entry
AL538_18185 CDS
T04380
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_18185
Enzymes [BR:
vhr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AL538_18185
DNA repair and recombination proteins [BR:
vhr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AL538_18185
Prokaryotic type
AL538_18185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
T2SSppdC
Motif
Other DBs
NCBI-ProteinID:
AMF99657
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All DBs
Position
2:225167..226648
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AA seq
493 aa
AA seq
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MQTINLVWLKRDLRLTDHLPLQHALSSENPTVLLYIFEPMLLDDPHYSERHWRFVWQSLQ
DMDVQLAQHDQKISVMFGNARDCLSAIQKQFNINAVFSHQEIGLNCTFERDKQVSAWLQA
QGIPWHEFEHGAVVRGAKDRFGWDKHWDTVMRAPIEKIELESASLITLDIDALGFTFTPP
PSWLEKVKGMQTGGSSLAWQTLEDFFQRRGRDYYRSISNPTASRTACTRLSPYLAWGNIS
LREVYQYLLQHWQVTGFRRSLIALSSRLHWHCHFMQKFESECEMEFRCVNQAYDPLLRQA
NNIDPIRLDAWKEGTTGIPLVDACMRCLHHTGYINFRMRAMLVSFLTHHMNMDWRDGVTH
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQEHDADGEFIHKWIPELAKVPT
PLLFEPWKMTAMEVVMYQLEPDSKYLAPIVDVEASAKAARERLWAWRKRTDVKMEGTRIL
AQHVRSSNKKKAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaatcaacttagtatggctaaaacgcgacttacgcctgaccgaccaccttcct
ttgcagcatgctctatcttctgagaatccaacagtgctgctctatatttttgagcccatg
ctgctagatgacccacattactccgaacgtcattggcgctttgtttggcagtcactccaa
gatatggacgtacagcttgcccaacatgatcaaaagatctcagtaatgtttggcaatgct
cgggattgtttgagtgcaattcaaaaacaattcaacatcaatgccgttttctctcatcaa
gaaattggattgaattgtacgtttgagcgagataaacaagtatcagcatggcttcaagca
caaggcattccatggcatgagtttgaacatggcgcagttgtgcgaggtgcaaaagaccga
ttcggctgggacaaacactgggataccgttatgcgagctcccatagaaaagattgaactt
gaaagcgcttctcttattaccctcgacattgacgcgctaggtttcacctttactcctccc
ccttcttggttagaaaaagtaaaaggcatgcaaactggcgggagctcactcgcttggcaa
acattggaagacttttttcaacgccgaggacgagattattaccgcagtatttccaacccg
acagcatctcgaacagcctgtactcgcctctctccttatcttgcatggggtaatatttcg
cttcgagaagtgtatcaatacctcttgcaacattggcaagtgacggggtttcgtcgcagc
ctaattgcgttgtcttcaaggcttcattggcattgtcattttatgcagaaatttgaatct
gaatgtgagatggaatttcgctgtgtgaaccaagcctatgaccctttgcttcgccaagcg
aacaacatcgacccaatccgactagatgcttggaaggagggaaccactggcatacctctc
gtcgatgcctgtatgcgctgccttcatcacacgggatacatcaactttcgaatgcgcgcg
atgctagtaagctttttaacgcatcacatgaacatggattggcgcgatggcgtaactcac
ctagcgcagctatttctcgactttgagccgggtatccattatccacaatttcaaatgcag
gctggagtgactggcaccaataccattcgtatctacaatccgacgaaacaagcacaagaa
cacgatgccgatggtgaattcattcataaatggattccggagctcgctaaggtacccacc
ccactgttgtttgagccttggaaaatgaccgcaatggaagtcgtgatgtaccagttagaa
ccggactcaaaatacctcgccccaatagtcgatgtagaagcgagtgcgaaagcagccaga
gaacgattgtgggcttggcgaaaacgtaccgacgtaaaaatggaaggtacacgcatttta
gctcagcacgtccgttcttctaataaaaagaaagccagttga
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