KEGG   Vibrio harveyi: AL538_18480
Entry
AL538_18480       CDS       T04380                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
vhr  Vibrio harveyi
Pathway
vhr00330  Arginine and proline metabolism
vhr00480  Glutathione metabolism
vhr01100  Metabolic pathways
vhr01110  Biosynthesis of secondary metabolites
vhr04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    AL538_18480 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    AL538_18480 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    AL538_18480 (speF)
Enzymes [BR:vhr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     AL538_18480 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase GKRP_SIS_2
Other DBs
NCBI-ProteinID: AMF99713
UniProt: Q1W5U7
LinkDB
Position
2:complement(291720..293900)
AA seq 726 aa
MKRLIIGVSNYMPEDFSLLSESLDEQFNRTLKPLEHVELTDVGAAIITSADIKAGLHKII
SETGYGIPVFLVTDENPVSAEDYVWLTGVIDLERQSIEYYGRQINEAVTKYECRLLPPFF
KQLTHYVEMGNSAFDCPGHQGGQFFKKHPAGKQFYDFFGENLFRSDLCNADVDLGDLLIH
EGSAHQAQAHAAKVFNSDKTYFVLNGTSASNKVVCNALVTEGDLVMFDRNNHKSNHHGAL
IQAGGMPVYLETARNPWGFIGGMDEHCFDEEYIRAQIAKVSPERARDERPFRLAIIQLGT
YDGTIYNARYVMDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVIVTQS
VHKQQAGFSQTSQIHKKDHHIKGQARYCNHKRFNNAFMMHASTSPFYALFSALDVNAKIH
DGEAGLRLWRDAVKTGIEARKEILKSCELIRPFIPDQVDGQPWGSYDTDLIATNKKFFMF
EPDASWHKFEGYGEGQYFVDPCKLLLTTAGIAEDGSYADFGIPATLLANFLRENGIIPEK
CDLNSILFLLTPAEDMGKIRHLVAQINRFEKFIRDDAPLNIVLPRVYEANKERYRGYTIR
QLCQEMHDMYKELNVKQLQKAMFRSEYFPTMVHKPDVATRKYFRGECDYLPLKEAVGRVA
AEGALPYPPGIICVITGEIWTQQVVDYFLSLEEGINRFPGFAPEIQGVYLEDVNGRTTAH
CYALKD
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgaaacgtttaattatcggtgttagtaattacatgccagaagacttcagtttattatct
gaatctttggatgagcaatttaaccgaactttaaaaccactagagcacgtcgaattaact
gacgttggcgctgcaattattacttctgcagatattaaggctggtctacacaaaattatt
tctgaaacgggttatggcattccggttttcttggtcacagatgaaaacccagtttcagca
gaagattacgtatggttaaccggcgttatcgatttggaaagacagtcaattgaatactac
ggtcgccaaatcaatgaggctgtcaccaaatacgaatgtcgcctacttccacctttcttc
aaacagttgactcactacgtggaaatgggcaactctgcattcgactgtccaggacaccaa
ggcggccagttcttcaaaaaacacccagcaggtaaacagttttacgatttcttcggtgaa
aacctattccgtagtgacttgtgtaacgcggacgttgatttaggtgacttgctgatccac
gaaggttctgctcaccaagctcaagcacacgcagcaaaagtgttcaactcagacaaaacc
tacttcgtacttaacggcacttcggcttcaaacaaagtggtttgtaacgcgttagtgacc
gaaggtgacttggtgatgtttgaccgtaacaaccacaaatcaaaccaccacggtgcattg
atccaagcgggcggtatgccagtttacctagaaacagcacgtaacccatggggttttatc
ggtggtatggatgagcactgttttgatgaagaatacatccgtgctcaaattgcgaaagtg
tcaccagagcgcgctcgtgatgaacgtcctttccgtcttgcgatcatccaattaggtact
tacgacggtaccatctacaacgcacgttacgtgatggataagattggtcatctctgtgat
tacatcctatttgactcggcatgggtgggctacgagcagttcattcctatgatgaaagac
tgttctccactgctactggatctgaaaccagaagatgccggtgtgattgtgactcagtct
gttcacaagcaacaagcaggcttctctcaaacctcgcaaatccacaaaaaagaccaccat
atcaaaggtcaggctcgctactgtaaccacaaacgcttcaacaacgcgtttatgatgcac
gcgtcaacttcaccattctacgcgctgttctcagcattggatgtgaacgcgaagatccac
gatggtgaagcgggtctacgcctatggcgtgatgcggttaagactggtatcgaagcacgt
aaagaaatcctgaaaagctgtgagctgattcgtccgttcattcctgaccaagttgatggt
caaccatggggcagttacgacaccgatcttatcgcaaccaataagaagttcttcatgttc
gagccagacgcaagctggcataaatttgaaggctacggcgaaggtcagtacttcgttgac
ccatgtaaattgctactcactacagcaggtattgctgaagatggtagctacgcagacttt
ggtattcctgcaacgttattggctaacttcctacgtgagaacggcatcatccctgagaag
tgtgacttgaactctatcttgttccttctcactccagcagaggacatgggtaagatccgt
catcttgtggcgcaaattaaccgcttcgagaaatttattcgtgatgatgcgccgctaaac
atcgtgcttcctcgcgtttacgaagcgaacaaagaacgctaccgcggctacaccatccgt
cagctatgtcaggaaatgcatgacatgtacaaagagctgaacgtgaaacagctacaaaaa
gcaatgttccgtagcgaatacttcccaactatggtgcacaaaccagatgtggcaacacgc
aaatacttccgcggcgagtgtgattacttgcctctgaaagaagcggtaggtcgtgtcgca
gcagaaggtgcgcttccttaccctccaggcattatctgtgtgatcacgggcgaaatctgg
actcaacaagtggtcgattacttcttatctctagaagaaggcatcaaccgattcccaggc
ttcgcaccagagattcaaggtgtgtacctagaagacgtcaatggtcgcaccaccgcccat
tgctacgcccttaaagattaa

DBGET integrated database retrieval system