Vibrio harveyi: AL538_23870
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Entry
AL538_23870 CDS
T04380
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00260
Glycine, serine and threonine metabolism
vhr00460
Cyanoamino acid metabolism
vhr00630
Glyoxylate and dicarboxylate metabolism
vhr00670
One carbon pool by folate
vhr00680
Methane metabolism
vhr01100
Metabolic pathways
vhr01110
Biosynthesis of secondary metabolites
vhr01120
Microbial metabolism in diverse environments
vhr01200
Carbon metabolism
vhr01230
Biosynthesis of amino acids
vhr01240
Biosynthesis of cofactors
vhr04981
Folate transport and metabolism
Module
vhr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL538_23870 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AL538_23870 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AL538_23870 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AL538_23870 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AL538_23870 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AL538_23870 (glyA)
Enzymes [BR:
vhr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AL538_23870 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMG00717
UniProt:
K5UI73
LinkDB
All DBs
Position
2:complement(1522623..1523918)
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AA seq
431 aa
AA seq
DB search
MNKSYPNHSLENFFSTNLSATDDAVFAGIQAEFARQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYEDVRQLALEHQPKM
IIAGGSAIPRTIDFAKFREIADEVNAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIASKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDAEVEKRVRKQV
KELCSRYPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagttaccctaaccacagcttggaaaactttttctctaccaacctctccgcg
acagatgacgctgtctttgctggaattcaggcagaattcgctcgccaaaacgaacaaatc
gaacttatcgcttctgagaacatcgtgtctaaagcggtaatgcaagctcaaggcacatgc
ctaacaaacaaatacgctgaaggttacccaggtcgccgttactatggtggttgtgagcac
gtagatacggtggaagccattgctatcgaacgcgcgaaaaaacttttcaactgtgaatac
gcaaacgttcaaccacactcaggcgcacaagcaaacggcgcggtaaaactggcactactt
caacctggcgacactattcttggtatgtctctggacgcaggtggtcacctaacacacggt
gcacgccctgcactttctggtaagtggtttaacgcagttcaatatggcgttgatcgcgaa
acattagaaatcaactacgaagacgttcgccaactagcacttgagcaccaacctaaaatg
atcatcgcaggcggtagtgctattccacgtactatcgactttgcaaaattccgcgaaatc
gcagacgaagtaaacgcgattcttatggtcgacatggcgcacatcgccggtcttatcgca
acaggcgcgcaccctagcccgcttcctcacgcacacgtggttacgactacaacccacaaa
acactgcgtggtccacgtggcggtatgattctgaccaatcacgaagacatcattaagaaa
atcaactcagcggtattcccaggcctgcaaggcggtccactgatgcacgtgattgcgtct
aaagcagtcgcgttcggtgaggcgcttggtcctgaattcaaaacttatattgattcagtg
atcaacaacgcaaaagttctagcggaagtattgcaaactcgcggttgcgacatcgtaacc
ggtggtactgacacacacctaatgctggttgaccttcgccctaaaggcttgaaaggtaac
aaagcagaagaagcactagagcgtgcaggtatcacgtgtaacaaaaatggcatcccattc
gacacagagaagcctatgattacatcgggcatccgtttaggaacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaattggattggtgacgtactggac
ggtttggtgaacaaccctgaaggtgacgcagaagtagaaaaacgcgtacgcaagcaagtg
aaagagctttgcagtcgttaccctctttaccaataa
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