Vibrio harveyi: AL538_25010
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Entry
AL538_25010 CDS
T04380
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vhr
Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vhr03016
]
AL538_25010
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AL538_25010
Transfer RNA biogenesis [BR:
vhr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AL538_25010
Prokaryotic type
AL538_25010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Glycos_transf_1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AMG00925
UniProt:
A0ABM5Y5H6
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All DBs
Position
2:complement(1777504..1778481)
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AA seq
325 aa
AA seq
DB search
MELYFLGTSSGVPTKSRNVSATALLESKGKGWFLIDCGEATQHQLLHTPLSLNYLRAICI
THIHGDHCYGLPGLLASAGMNNRKDPLTIIAPEGIKQWFEATQAFTKLYLPFELHFIEVE
QFDSIEIGQFTITATALSHRVPSFAYCFEESTIRMYPDIDKLEQLNIPRGPIWGELVRGN
DVEYQGQTLMSKAFTKLAHPPRKVIICGDNDTPEKLDSLIEGAHLLVHESTYSEAMKERA
GEVGHAYSSQVASYAQTKQIPSLILTHFSPRYQFSSEAEVSIEQIRQEAQTAYSGHLFLA
HDLAHYRIDRAGLVEEVKDAKDMDE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtatttcttaggaacgtcctctggggttccaactaaatcccgtaatgtttct
gcgactgctttgctggagagcaaggggaaagggtggtttctgattgactgtggagaggcg
actcaacaccaattgctacacactccgttatcactgaattacttgcgagctatctgtatt
actcacattcacggtgaccattgctatggtttaccgggcttgctcgccagtgcaggcatg
aataaccgcaaagatcctctgacgatcattgcgccagaggggattaaacagtggtttgaa
gcgactcaggcgttcaccaaactctatctaccatttgaacttcacttcattgaagtagag
cagtttgattcgattgaaattggtcagtttacgattaccgcaactgcactttcccatcgt
gttcctagctttgcttactgttttgaagagtcaaccattcgtatgtatccagacatcgat
aagcttgagcaattgaacataccgaggggacctatctggggagaacttgtgcggggtaat
gatgtggagtaccaaggtcaaaccttaatgagtaaggcgtttactaagcttgcacatcca
ccgagaaaagtgattatttgtggtgataacgacacaccagagaagctcgatagtctaatt
gaaggcgcgcatctgttagtacacgaatcaacgtactcagaagcgatgaaagagcgagca
ggagaggtcggtcacgcttattcttcacaagtcgccagttatgctcagacaaaacaaatt
ccgagcttaattctcactcactttagtcctcgctatcaattcagctctgaagcggaagta
tcgattgagcagattcggcaagaagctcaaaccgcttactctggtcatctctttcttgct
cacgatctcgcgcattatcgaattgacagagcgggtttggttgaggaggttaaagacgct
aaagatatggatgaataa
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