Vibrio harveyi: AL538_25880
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Entry
AL538_25880 CDS
T04380
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
vhr
Vibrio harveyi
Pathway
vhr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AL538_25880 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vhr02000
]
AL538_25880 (choW)
Transporters [BR:
vhr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
AL538_25880 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AMG01089
UniProt:
A0A0B4IW06
LinkDB
All DBs
Position
2:complement(1984022..1984864)
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AA seq
280 aa
AA seq
DB search
MNFITDNKLPLGEWMETGVDWLTMNASGFFDAISIFLETIILFVVDIFKWMPPAAPIIMT
AAIAWFLHRSIPLVVFIVLALLTILNLGYWQEMLETFVLVFAATTISVLIGVPLGIMAAH
RPWLYTLLRPILDLMQTVPTFVYLIPTLVLFGLGIVPGLISTIIFAIAAPIRLTYLGITK
VPEELIEAGKAFGASRMKLLFKVELPAALPSIMAGVTQCIMLSLSMVVIAALVGADGLGK
PVVRALNTVNISQGFEAGLAIVLVAIILDRLCKAPNQKEA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttattacggacaacaaacttccgttgggcgaatggatggaaacaggcgtggat
tggttaaccatgaacgcgtcgggtttctttgatgctatctctatttttctcgaaaccatc
attctattcgtggtggatattttcaaatggatgccaccggcagcacctatcatcatgacc
gcagcgattgcgtggttcctacaccgcagcattcctttagtcgtgtttatcgtgctggcg
ttgctgaccattcttaacctcggctactggcaagaaatgctggaaacctttgttctcgtc
ttcgctgcgacaacgatttccgtattaattggcgtgccgcttggtatcatggcggcgcat
cgcccgtggttgtataccttattgcgcccgatactcgatttaatgcagaccgtaccaacg
tttgtgtacctgatcccaacattggttctgtttggtttaggcatcgttccggggctgatt
tccaccattatctttgctatcgccgcgccgattcgtctgacttaccttggcattaccaaa
gtgccagaagagctgattgaagcgggtaaagcttttggtgccagccgtatgaaattgcta
ttcaaagtcgaactcccagcagcattgccaagcattatggcgggtgtgacccagtgcatc
atgttgtcgctttctatggtggtgattgctgcgctagtcggtgctgatggtcttggtaaa
ccagtcgtacgagcactgaacaccgtgaacatttctcaaggctttgaagccggtttagcg
attgttttggtcgcgattattctcgaccgcttgtgcaaagcaccaaaccaaaaggaggca
taa
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