Vibrio harveyi: AL538_26660
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Entry
AL538_26660 CDS
T04380
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00630
Glyoxylate and dicarboxylate metabolism
vhr00680
Methane metabolism
vhr01100
Metabolic pathways
vhr01120
Microbial metabolism in diverse environments
vhr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL538_26660
09102 Energy metabolism
00680 Methane metabolism
AL538_26660
Enzymes [BR:
vhr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
AL538_26660
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
NAD_binding_8
Fer4
Fer4_9
Fer4_8
DAO
Fer4_18
Fer4_6
FAD_oxidored
FAD_binding_2
Thi4
NAD_binding_7
Fer4_2
Fer4_7
HI0933_like
Fer4_21
FAD_binding_3
Fer4_16
Fer4_10
Amino_oxidase
GIDA
Fer4_3
Fer4_22
AlaDh_PNT_C
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
AMG01240
UniProt:
A0A454BG71
LinkDB
All DBs
Position
2:complement(2155278..2159516)
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AA seq
1412 aa
AA seq
DB search
MIEIVIDGKYRIVEEGLTLLEAAKVCGVEIPSLCGMNKSNEKVPCDLCVVEVESGGTKRA
CELEVYRGLNVVTQSEQLSEHRRKALNRIMTDHYADCEAPCKTACPAGVDIQSYLYHIAQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRSLVDEPIAIRQLKRHAADADLSAHEA
YVPEKKSSKGLNIAVVGSGPGGLTAGYYLSNEGYDVTVFESMPKAGGWLRYGIPEYRLPK
DILDKEIELMCRNGMQVRTNQKLGVDFTLSQLSEEYDAVCLAVGASQAVEMHYTGSDLEG
CYLGVDYLKDYVTEQNYVTGQKVAVIGGGNTAIDCARTARRAGADTTLIYRRTRDEMPAE
DYEIVEAEHEGVKFHFLTNPAENLADETGRVSAIRLERMALGEPDASGRRSPKPTGEFFT
EEFDTVIAAVSQKPDLSFLEGEDLSIPLTRWNTSDADEKTMHTGTGNIFSIGDFRRGPAT
AVEAVGDGRVAAKAIDLFLNGDMADMPKAAFNSRKEKKLSQVDPLHFENIQKVARSIMPE
LTPAQREQSFAEVELGFDNEEAMKEAARCLECGCQANTDCALRDYSTEYEAEQSFDFSLQ
IKSHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACRDKAVHGVLNFVCDK
QGRPALRPDDRPHFGSNKNGLTLMGDSNCVQCGACVQVCPTGAMVDSRDRSQGRTEDLKA
VDTICTYCGVGCKLTMFVDEATNTIRYVKGGDSPVNQGMLCVKGRFGFDFIGSEERLTTP
LIRKDGWLQPASWEEAIQLVASKFSGIKQDFGSNALAGFSSAKTTNEDNYAFQKFVRREL
GTNNVDHCARLCHASSVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTTSAHPIIASHI
KQAIRHHGARLIVADPKRVDMAEHAELYMAHRPGTDVMLLNGVMQQIIKNGWYDQEYIEE
RVDGFDTLLQEVMSPAYNLDKVELVTGVKAEDIQAMARMIGTADRTAVYYSMGITQHTTG
HDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNSFPGYQKVYNPIVRQK
FAIEWNAPNLPSEQGLTLTEIIDAACHRDVRGMYIMGENPVLSDPNQAHVIEGLEALDFL
VVQDIFLTETAQYADVVLPSCSFAEKAGHFTNTERRVQRVNPVVTAPGEAKEDWWIIQEI
ANAMGSDWDYHCVSDITNEIARVTPQYAGLRWEAITPNGVQWPSNKNNPAGTRIMHQTQF
TRGKGQMVGVPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTKGLDNLAGPRAMVSV
EDAEALGISNGQRLKVSTRRGSIEIDAFVTKRIQKGVVFIPFHFVESPVNRLTTTATDPH
AKIPEFKVAAVKVEVSEKVLHTEPATEAVHTI
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgtcatcgatggaaaatatagaattgtagaagagggtttaaccctttta
gaagcagcaaaagtgtgtggggtcgagatcccatcgctgtgcggaatgaacaaaagtaat
gaaaaagtgccgtgcgacttgtgtgtggttgaagtcgaaagtggcggcactaaacgcgcg
tgtgaactcgaagtttaccgtggtctcaatgtggttacgcaatcagagcagttaagcgag
caccgcagaaaagcacttaaccgcatcatgacggaccattacgccgattgtgaagcgcca
tgtaaaaccgcgtgtccagcgggtgtggacatccaatcctacctttatcacatcgcacag
aacgatcatcaaaaagcgattgaagtgattaagcgtacgcttcctatgccgttatcgatt
ggtcgtgtgtgtccggcattctgtgagagcgaatgtcgccgctcgttagtcgatgagcct
attgcaattcgtcagcttaagcgtcatgccgcggatgcggatttgtctgcgcatgaagcc
tatgtaccagaaaagaaatcaagcaaagggttgaacattgccgtcgtaggcagtggtcct
ggtggtctaacggctggctactacttatcgaatgaaggctacgacgtcactgtctttgaa
tccatgccaaaagcgggcggttggttgcgttatggtattcctgaatatcgcctaccgaaa
gacattctcgataaagaaatcgaactgatgtgccgcaatggcatgcaggttcgcaccaac
caaaaactgggtgtggatttcacgctttctcaattgagcgaagaatacgatgcagtgtgt
ttagctgtcggtgcgtctcaagcggttgaaatgcattacacaggcagcgaccttgaaggt
tgttacctgggcgttgattacctgaaagattacgttactgagcaaaactacgtcacgggt
cagaaagtcgcggtgattggtggtggtaatacggcaattgactgtgctcgtactgcgcgt
cgtgctggtgcagacaccacgttgatttatcgtcgtacacgtgacgaaatgccggcagaa
gactacgagattgtcgaagcggaacacgaaggggtgaaattccactttttgaccaaccct
gcagaaaaccttgccgatgaaaccggacgcgtgagtgcgattcgtctagagcgcatggcg
ttgggtgagccggatgcatctggtcgtcgaagccctaaaccaaccggcgagttctttacc
gaagagttcgacaccgtgattgcggcagtatcgcaaaagccagatctgagcttcctcgaa
ggcgaagatttgtcgattccgcttacgcgctggaacacctctgatgccgatgaaaagacc
atgcacaccggcacgggtaacatcttcagtatcggtgatttccgccgtggtccagcaacg
gcggttgaagccgtgggtgatggtcgcgttgcggcaaaagccattgacctgtttttgaat
ggcgatatggcggatatgccaaaggcggcgttcaactcacgaaaagagaagaaactttct
caagtcgatccgcttcacttcgagaacatccaaaaagtcgctcgttctatcatgcctgaa
ctgactccagcacaacgcgaacaaagcttcgctgaagtggagttgggctttgataacgaa
gaagcgatgaaggaagctgcgcgctgtctagaatgtggttgtcaggcaaataccgactgt
gcgttgcgtgattactccaccgaatatgaagctgagcaaagctttgacttctctttgcag
attaaatcgcatcaagattggttagatcttcgtgcgaaagacttgcgtcataagtacgaa
gttgaccgcagttctgagtttattgagtttgatgctaaccgctgtattagctgcggtcag
tgcatccaagcgtgtcgcgacaaagccgtgcacggtgtactgaactttgtgtgcgataaa
caaggtcgccccgcgttacgtccagatgatcgtccacactttggaagtaacaagaatggt
ttaactctgatgggcgattcgaactgcgtgcaatgtggcgcgtgtgttcaagtgtgtcca
acgggggcgatggtcgatagtcgtgaccgttcgcaaggtcgtactgaagatctgaaagcg
gtcgacaccatttgtacatactgtggtgtgggttgtaagttgaccatgttcgtggacgaa
gcaaccaatacgattcgttacgtgaaaggcggtgactcgccggtgaaccaaggcatgctg
tgtgtgaaagggcgctttggttttgacttcattggcagtgaagagcgtcttaccacgcca
ttgattcgtaaagacggttggttgcagcctgcaagttgggaagaggcgattcagctggtt
gcgagcaagttctctggcatcaagcaagattttggcagcaacgcattagcgggtttctct
tcagcgaaaaccaccaacgaagacaactacgcgttccaaaaatttgtccgccgtgaattg
ggcaccaataacgtcgaccactgtgcgcgtttgtgtcacgcatcgagtgtaaccggtctt
gaggcatcactcggtagtggtgcaatgaccaacgacattccgagcattaagcactctgat
gtgatctttattattggttcggataccacatcggcgcacccgattatcgcttcacatatc
aaacaagcaattcgtcatcacggcgctcgtttgattgtagctgacccgaaacgtgtcgat
atggcagagcatgctgagttgtacatggcgcaccgtccgggtacggatgtgatgctcctg
aacggcgtcatgcaacagatcatcaagaacggttggtacgatcaagagtacatcgaagaa
cgtgtcgacggctttgataccttactgcaagaggtgatgtcgccagcttacaacctcgat
aaagtggagttggttacaggtgttaaagccgaagacattcaagcaatggcgcgtatgatt
ggcacggcagatcgtaccgctgtgtactactcgatgggtattactcagcacacgacaggt
catgacaacgtgcgttctatcgctaacctgcaattactgtgtggcaacatcggtattgaa
ggtggtggcatcaacccgctacgtggtcaatcaaacgtgcaaggcgcgtgtgatatgggt
gctttgccaaacagtttcccgggttaccaaaaggtatacaacccaattgtgcgtcagaag
tttgcgattgaatggaacgcgccaaatctgccttctgagcaaggtctaaccctgacagaa
atcattgatgcggcttgccatcgtgacgttcgtggtatgtacatcatgggtgagaaccca
gtattgagtgacccgaaccaagcgcatgtgattgaaggcttagaagcgctcgatttcttg
gtggttcaagacatcttcctaacggaaaccgctcaatacgcggatgtggttctgccttct
tgctcgtttgcagagaaagcggggcacttcaccaatacggaacgtcgtgttcagcgtgtg
aatccggttgtaacggcaccgggtgaagcgaaagaagattggtggattattcaagaaatc
gccaatgcaatgggcagtgattgggactaccactgcgtgtctgatatcactaacgagatt
gcacgagtgacgcctcaatacgcaggtcttcgttgggaggcgataacgccaaacggagtg
cagtggccgagcaacaagaacaacccagcaggtactcgcatcatgcaccaaacccagttt
actcgtggtaaaggtcaaatggtgggcgtaccgttccgttatgcggctgagctgccagat
gaggagtatccgcttgtgttaacgactggtcgtgtgcttgagcagttccacaccggcact
atgacgcgcaaaaccaaagggttggataatcttgctggtccacgtgcgatggtgagcgtg
gaagacgcagaagcgctaggcatcagtaatggtcagcgtttgaaggtgtctacacgtcgc
ggcagcattgagattgatgcctttgtgactaagcgcattcaaaaaggtgtggtgttcatt
ccattccactttgttgaatccccggtgaaccgcctaacgacaacagcgactgatccgcat
gcgaagatccctgaattcaaggttgccgcggttaaggtggaagtaagcgaaaaggttcta
catacagagcctgcaacggaagcagttcatactatttaa
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