Vagococcus hydrophili: G7082_01195
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Entry
G7082_01195 CDS
T07081
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
vhy
Vagococcus hydrophili
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
G7082_01195 (ltrA)
Enzymes [BR:
vhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
G7082_01195 (ltrA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
RdRP_1
IRF-3
Intron_maturas2
Motif
Other DBs
NCBI-ProteinID:
QIL47242
UniProt:
A0A6G8AS49
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All DBs
Position
complement(226533..227810)
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AA seq
425 aa
AA seq
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MYTETVLEQIVDRKNLNQAFKQVRRNKGAEGVDGMTIEETASYITSNRKEIVTQIRNRKY
KPSPVLRVEIPKPTGGVRLLGIPTVKDRVIQQAISQVISPKFDKEFSPYSYGFRPNKQAE
MAIQQSLDYFNEGYEWVVDIDLERFFDTVNHDRLMNLISRVIKDGDVISLIRKFLVSGVQ
VNGQVKPTDIGTPQGGNLSPLLSNIMLNELDKELEARQLHFVRYADDCLIMVKSEMSARR
VMRSVTKFIEEKLGLIVNVTKSKIIKAGDSELKYLGFSFYKGKDGYQARPHQASVESFKF
KLKRLTRKNWSVSIEDKIKRLNQVILGWINYFKIGKMKKNLSKIESHLRFRVRMCLWKQW
KTAQNRRKNLIKLGMDKYTAYKYSHTSKGVVRIAYSWVMTTTMTNKRVAELGLISCVEHY
SKVHS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagaaacagttttagaacaaatcgtggatagaaagaatctgaatcaagcattt
aagcaagtcagacgaaataaaggtgccgaaggtgtggatggtatgactattgaagaaacg
gcgagttatataacgtctaatagaaaagaaatagtcacccaaatcagaaacagaaagtat
aaaccatcccccgttttaagagtagaaataccgaagccaactggtggtgtccgactttta
ggtataccaacagtaaaagatcgtgtgatacagcaagctatatctcaagtgatttccccc
aagtttgataaggagttcagtccatatagctatggatttaggcctaacaaacaagctgaa
atggccatccaacaatcgttggattactttaacgaaggctatgaatgggttgtagatatt
gatttggagagattctttgatactgtgaatcatgatagattaatgaatttaatctcacga
gtgataaaagatggtgatgtcatttctctgattagaaaatttttagttagtggtgtacaa
gtcaacggacaagttaagccaacggatataggtacaccacagggcggtaatttatctcct
ctactaagtaatattatgttaaatgaattggataaagaacttgaagcaagacagcttcat
tttgtcagatatgcagatgactgtttaattatggtgaaaagtgaaatgtcagcgagaaga
gtcatgcgctcagtaacaaaatttatcgaagagaaattaggactaattgtgaacgtcaca
aaatccaaaataattaaagctggagactcagagttgaagtatttaggtttttctttttat
aaaggaaaggatggctatcaagctagaccacatcaagcatcagttgaaagctttaagttt
aaattaaaaaggctgacacgtaaaaattggagtgtcagtatcgaggataaaattaaacga
ttgaatcaagtgatattaggttggattaactattttaagattggaaaaatgaagaaaaat
ctatcgaagatagaatctcatctacgtttccgagtgaggatgtgtttatggaaacaatgg
aaaaccgctcaaaatagaagaaagaatttaataaaactaggtatggataaatatactgct
tataaatacagtcatacaagtaaaggcgtagtgaggatagcttattcatgggtcatgact
acaacgatgacaaataagagagtagccgaattaggactaatctcttgtgtagaacattat
agtaaagtacatagttaa
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