KEGG   Vagococcus hydrophili: G7082_01350
Entry
G7082_01350       CDS       T07081                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
vhy  Vagococcus hydrophili
Pathway
vhy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vhy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    G7082_01350 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vhy03400]
    G7082_01350 (uvrA)
DNA repair and recombination proteins [BR:vhy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G7082_01350 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      G7082_01350 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_23 nSTAND3 AAA_22 AAA_25 AAA_33 NACHT AAA_14 MMR_HSR1 Viral_helicase1 NB-ARC DnaJ_CXXCXGXG cobW Septin GCE_fung DUF87
Other DBs
NCBI-ProteinID: QIL47272
UniProt: A0A6G8AQQ7
LinkDB
Position
complement(257073..259901)
AA seq 942 aa
MANDKIVIRGARAHNLKNIDVTIPRDELVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGHP
ICPNDGTEISSQSPEQMTDRILELEERTKVQILAPIVRSKKGQHKKVFEKIKKEGFVRVR
IDGESYDIEEVPELEKNKKHSIEIIVDRIVVKEGVRSRLFDSFEMALRLSEGYALVDVMG
QEEMLFSEHYACPYCGFTVGEIEPRLFSFNTPFGACPECDGLSVKLEVDKDLVVPDGSKT
LREGAIAPWNPISSNYYPQMLEQACEQFGIDFDTPFEQLESEQQDILLKGSKGEEFHFHY
ENEFGGVRDVDIPFEGILINIKRRYHETNSDYTREQMKLYMTELTCETCHGYRLNEEALS
VKVDGKHIGQISNLAVGDSLAYFDELSFGEQEQMIANPILKEIKDRLSFLKNVGLTYLTL
SRAAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNNRLIDSLKKMRDLGNT
LIVVEHDEDTMRSADYLIDIGPGAGELGGQIIAAGTPSEVEQDENSLTGQYLSGKKQIPV
PTERRTGNGKSIVVKGAAENNLKNLNVSFPLGKFVAVTGVSGSGKSTLVNGILKKALAQK
INRNSEKPGKYKSITGYEDIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRDLFSKTNEAK
IRGYKKGRFSFNVKGGRCESCRGDGIIKIEMHFLPDVYVPCEVCHGQRYNSETLEVKYKG
KNIAEILEMTVEDAVDFFKAIPKIHRKMQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAS
ELHKRSSGKNFYILDEPTTGLHADDISRLIGVLTRLVDAGNTVLVIEHNLDVIKTADYII
DLGPEGGDGGGTIVTTGTPEEVMMVEESFTGYYLKEVMERFK
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggctaacgataaaatagttatccgcggagcacgtgcgcataacttaaaaaatattgat
gtgaccattccacgagatgagttagtagttattactggactttcaggttctgggaaaagt
tctttagcttttgatacattatatgctgaagggcaaagaagatatgtggaaagtctatcg
gcttatgcaagacaatttttaggtcaaatggataaaccagatgtggatagtattgatggg
cttagtcctgctatctcgattgaccaaaaaacaacaagtaaaaaccctcgttcaactgtt
ggaacggtgacagaaattaatgactatttgagattattgtatgctcgtgtaggtcatccg
atttgtccgaatgacggcacagaaatcagcagtcaatctcctgaacagatgacggaccga
attttggaattagaagagagaaccaaagttcaaattttagcaccgattgttcgtagtaaa
aaaggacaacacaaaaaagtttttgagaaaatcaaaaaagaaggttttgtccgcgttcga
attgacggagagagctatgatattgaagaagttccagaacttgaaaaaaacaagaaacac
tcaattgagattattgtggaccgaattgtggttaaggaaggtgtccgctcacgactgttt
gattcttttgagatggctttacgcttatcagaaggttacgccttagtcgatgtcatggga
caggaagaaatgctgtttagtgaacactacgcttgtccttattgcggctttacagtaggt
gaaattgaaccaagattattctcattcaatacaccttttggggcttgtcctgagtgtgac
ggattaagcgttaagttagaagtggataaggatttagtggttcctgatggcagtaaaaca
ttaagagaaggagccattgcaccgtggaacccaattagttcaaactattatccacaaatg
ttggaacaagcttgtgaacaatttggaattgattttgacacaccttttgagcaattagaa
agtgagcaacaagacattttactaaaaggctcaaaaggagaagagtttcactttcattat
gaaaatgaatttggtggcgtcagagatgtggatattccgtttgaaggtatcttgataaac
atcaaacgtcgctatcatgaaacaaatagtgattacacgagagaacaaatgaagttatat
atgaccgaattaacgtgtgaaacttgtcatgggtatcgtttaaatgaagaagctctttct
gtaaaagttgatgggaaacatattggtcaaattagtaacttagctgtcggagatagttta
gcttactttgatgagttatcatttggtgaacaggaacaaatgatagccaatccgatttta
aaagaaatcaaagatcgtttaagtttcttaaaaaatgtaggactgacttatttaacttta
agtcgtgcagctggtacgttatcaggaggagaagcgcaacggattcgattagcgacacaa
attggttctaatctttcaggggttctttatattttagatgagccgtcgattgggttacat
caacgtgataacaatcgcttaattgattccttgaagaagatgcgtgatttaggaaatacc
ttaatcgttgtggaacatgatgaagataccatgcgttcagcagattatttgattgatatt
ggtcctggtgctggtgaattaggtggtcaaattattgcagcaggaacaccgagtgaagtt
gagcaagatgaaaattcgttaacaggacaatatttatctggtaagaaacaaattccagta
ccaacagaaagaagaactggcaacggaaaatcaatcgttgttaaaggtgcagctgaaaat
aatttgaagaacttaaatgtgtcattcccactaggtaaatttgtggcggtgacaggcgtt
tcaggttcaggtaaaagtactttagttaatggaatcttgaaaaaagcgttggctcaaaaa
atcaatcgtaattcggaaaaacctggcaaatataaatcaataacaggttacgaagacatt
gaaaaaattattgatattgaccaaagtccgattggtcgaacacctcgaagtaatccggca
acttacacgagtgtctttgatgatattcgagatttgttctcaaaaacaaatgaagcgaag
attcgtggttataaaaaaggacgtttcagctttaatgttaaaggtggacgttgtgaatct
tgtcgtggggacggtattattaagattgaaatgcactttttaccagatgtgtatgttcct
tgtgaagtttgtcatggtcagcgttacaattcggaaactttagaggttaaatacaaaggt
aaaaatatagcagaaattttagagatgacggtggaagatgcggttgatttctttaaagca
atacctaaaattcatcgtaaaatgcagaccattgttgatgttggtttaggttatgttaaa
ttagggcaatcagcaaccacattatctggtggggaagctcaacggatgaaacttgctagt
gaactacataaacgttcctctggcaagaacttctatattttagatgaaccaacaacggga
cttcatgcagatgatatcagtcgattgattggtgtgttaacccgtttagtggatgcaggt
aatacagttcttgtgattgaacataatttagatgtgattaaaacagcagattacattatc
gacttaggaccagaaggcggcgatggtggcggtacaattgtaacgacaggaacaccagaa
gaagtcatgatggtcgaagaaagcttcacaggttattatctaaaagaagtaatggaaaga
tttaaataa

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