Vagococcus hydrophili: G7082_03170
Help
Entry
G7082_03170 CDS
T07081
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vhy
Vagococcus hydrophili
Pathway
vhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G7082_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhy03400
]
G7082_03170
Enzymes [BR:
vhy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G7082_03170
DNA repair and recombination proteins [BR:
vhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G7082_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
AAA_22
UvrD-helicase
AAA_12
nSTAND3
T2SSE
AAA
SLFN-g3_helicase
AAA_28
AAA_16
RsgA_GTPase
NPHP3_N
AAA_29
HTH_IclR
IMS_HHH
Gal11_ABD1
Motif
Other DBs
NCBI-ProteinID:
QIL47607
UniProt:
A0A6G8ARI8
LinkDB
All DBs
Position
complement(657774..660278)
Genome browser
AA seq
834 aa
AA seq
DB search
MVFIFEEETVEKNYIVGQVVTTFFENATNFYKVLLVNVKDTNTSYTAQEIVVTGTFGQIQ
EDELYRFYGDIVNHPRYGEQLKVDSYQQDKPTSLSGLISYLSSDKFPGIGKKTAESMVDL
LGENAIDKIIEDPEYLLEIKGLNEKKRKMIVETLKANYGMEQIIVGLNQYGFGNQLAFSI
YQFYKEETLKIIDENPYQLVEDIEGVGFKKADALAEQIGIKADSPQRLRAAIVHELFQSC
LNTGNTYMEAKQLLEVALMTLESSRPFEINPTLVAEEIIHLAEEGVIIQEGTKLYEKSLY
FSEVGITTSIKRLLKRKKEISYPKKEIENQLKVIEKLFNISYGESQTQAIKEAITSPFFI
LTGGPGTGKTTVVNGIVTLFAELNGLSLDPNEYTQEVFPILLAAPTGRAAKRMNEMTGLP
ASTIHRLLGLTGREKEVLDEAKELEGGLLIVDEMSMVDSWLANTLLKSIPNNMQVIFVGD
KDQLPSVGPGQVLTDLLAVKEIPKRELTDIYRQEDGSTIISLAHSIKNGKMPQDLMKNQK
DRSFIPCSVNQIESVVKQVVLRAKDKKFSPQEMQVLAPMYRGKAGIDQLNQLMQEILNDN
EDGTRKEVKWLDKVYRIGDKVLHLVNSPEFNVFNGDMGEITGITYGKDTDDKIDEMTLLF
DETEVVYKRQEWNKFTLAYACSIHKSQGSEFKMVILPLVKQYGRMLQRKLIYTAVTRSKD
FLILLGEEEAFKLAIESEMIPRQTTLKERLVEAEEQLEEQENQLKLYEEEKTEEVKKELS
FEEKDSVKEEPISLFEEEPVSEKPKSFDLTIELVTKQQVDPMIGMDDVSPYDYM
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
ttggtttttatttttgaagaagaaaccgttgaaaaaaattatattgtgggtcaagtagtg
accactttttttgagaatgctactaatttttataaagttcttttggtcaatgttaaagat
actaatacttcttatacggcgcaagaaattgttgtcacagggacatttggtcaaattcag
gaagatgagttgtaccgtttttacggggacattgtcaatcatccaagatacggggaacaa
ttaaaagttgatagttatcaacaagataaaccaacctcactttcaggcttgattagctat
ttatcaagtgataaatttccagggattggaaagaaaacagcagagagtatggttgattta
ttaggtgagaatgcgattgataagattatcgaagaccctgagtaccttcttgagattaag
ggactaaatgagaaaaagcgcaaaatgattgtggaaaccctaaaagcaaattacgggatg
gaacaaattattgttggtctgaatcaatacggtttcgggaatcaattggctttttctatt
tatcaattttataaagaagaaacgttgaaaattatcgatgaaaatccttaccaattagtg
gaagatattgagggtgttggttttaaaaaagctgatgccttagcagaacaaattggaatt
aaggcggattctccccaaagacttcgagcagcgattgttcatgagttgtttcaaagttgt
ttaaatacagggaacacctatatggaagcgaagcaattgttagaagttgctttaatgaca
ttagagagtagccgtccttttgagataaatccaactcttgtggcagaagagattattcac
ctagcagaagagggcgtgattattcaagaaggaactaaactgtatgaaaaatcattgtac
ttttcagaagtggggattacgacgtcgattaaacgattgttaaagcgtaaaaaagaaatt
tcttatccgaaaaaagaaatagaaaaccagcttaaagtaattgaaaaattatttaatatt
agctacggagagtcacaaacccaagcgattaaagaagcaatcacttcgcctttttttatt
ttaacaggtggtcctggtacagggaaaacaacggtagtgaacggaattgttacgttattt
gctgaactgaatggactctctcttgatccaaatgagtatacacaagaagtctttccaatt
cttttagctgcgccaactggacgagcagccaagagaatgaatgagatgactgggttacca
gcaagcaccattcatcgtttgttaggtttaacaggtcgagaaaaagaagtgttagatgaa
gctaaggagcttgagggtggcttattgattgtggatgaaatgtccatggtggattcatgg
ttagctaataccttactcaaatcaatccctaataacatgcaagttattttcgttggggat
aaagatcagttaccttctgttggtcctggccaagtgttaacagatttactagccgttaaa
gaaatacctaagcgagaattaacagatatttatcgtcaagaagatgggtcaaccattatt
tctttagcccatagtataaagaatgggaagatgcctcaagacttgatgaagaatcaaaag
gatcgctcctttattccgtgttccgttaatcaaattgagtctgttgtgaagcaagtggtt
ctgcgggcaaaagataaaaaattcagtcctcaagagatgcaagttttagccccgatgtat
cgtggtaaagcggggattgatcaactgaatcaactcatgcaagaaattttaaatgataac
gaagatggcactagaaaagaagttaagtggttagataaagtttaccgaatcggcgataag
gtccttcaccttgttaatagtcctgaattcaatgtctttaatggggatatgggtgaaatt
accgggattacctacggaaaagatacagacgataagattgatgagatgacacttttattt
gatgagacagaagtggtttataagcgtcaagaatggaataaatttaccttagcttatgct
tgttctatccataaatctcaaggtagcgagtttaaaatggtgattctaccactagttaaa
cagtacggtcgtatgcttcaaagaaaattaatttatacggcagtcacaagaagtaaagac
tttttgattttactaggggaagaagaagcttttaagttggccattgaaagtgaaatgatt
ccgaggcagacgacgttaaaagaacggttagttgaggcagaagagcaattagaagaacaa
gaaaatcagttgaaattatacgaagaagaaaaaactgaggaagtaaaaaaagaattatcc
tttgaagagaaggacagtgttaaagaagagccaatttctttatttgaggaagaacctgtg
tcagaaaaacctaaaagttttgatttaacgattgagttagtgacaaaacagcaggtggat
ccgatgattgggatggacgacgtaagtccttatgattatatgtaa
DBGET
integrated database retrieval system
