Vagococcus hydrophili: G7082_07485
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Entry
G7082_07485 CDS
T07081
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vhy
Vagococcus hydrophili
Pathway
vhy03420
Nucleotide excision repair
vhy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G7082_07485
03430 Mismatch repair
G7082_07485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhy03400
]
G7082_07485
Enzymes [BR:
vhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7082_07485
DNA repair and recombination proteins [BR:
vhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7082_07485
MMR (mismatch excision repair)
Other MMR factors
G7082_07485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
UvrD_C
SLFN-g3_helicase
AAA_30
AAA_16
ResIII
DEAD
Clat_adaptor_s
NACHT
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QIL48347
UniProt:
A0A6G8ATM8
LinkDB
All DBs
Position
1477195..1479327
Genome browser
AA seq
710 aa
AA seq
DB search
MTIQALEQERLTKTYEKLLQAQQASEKLLQKELEQGQKDLDVSQDDIRMSNDNWGDRLDS
FAVIEMKNREMDQRRFAIEMAEKRLAQINRLLESPYFGKIDVLFDEDEEIEPFYIGINGF
TDESHNNLIYDWRSPIAELFYNNELGDSSYEVNGNNIDVSIENRRQLVMERELLKFVFDT
AVAIDDEVLLSVLEKDATNAMQDITASIQKEQNLIIRDEKNSLMLVNGVAGSGKTSVIMQ
RIAYLLYRNRQDINEDDVLILSPNEGFIKYISEVLPSLGEKNPLNLTFRGLLEQLTLTET
ETEETYFNRITQLDVSEQTKVLRSQAFVQFLKEKGNDILSSSELPVSGINLKDEVLIKAA
TILDYFKNAPKTVSFLDQVQGVKLHLESLWEEILNKESLESKNQDQLQLLSEQEQRQLFG
KLIPDTEEQIMRFTKKMLRKKYRSIPEKIKELEWLDTQKLMEILYESYTGVAYQEGEETV
DSEVIYLLTQHLFVEKLYAPRLKFLFIDEVQDYTSAQICFIKELFPKAKMTMVGDEDQGI
FNSVIDFTQIEEILESYQGAPKTYNLQKSYRSSGAITQTFNKLRGKRHEDIIPIQPIGEV
PSYVSLNDFENLKNLIESKDIKNTRIITKTIEETQQLTAELDEDYLRGRKIKVTPISLAK
GLEFDYVLLYDVSSQNYQTDQDKRLLYTAVSRAMKTVMITYQDELVEWLN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcaagcattagaacaagaacgattaactaaaacgtatgaaaaattattgcag
gcacaacaggcaagtgagaaactacttcaaaaagaattagaacaaggacaaaaagatctt
gatgtgagtcaagatgatatcagaatgagtaacgataactggggagatcggctagattct
tttgcggtaattgagatgaagaatcgagagatggatcaacgtcgttttgcgattgaaatg
gcggagaaacgattagctcaaatcaatcgcttactagaatcaccttattttggaaagatt
gatgtcttgtttgatgaggacgaagagattgagcctttttacattggtattaatggattt
acagatgaaagccataataatttaatttatgattggcgttcaccgattgctgagctattt
tataataatgaacttggtgactcttcttatgaagtgaatgggaataacattgatgtcagt
attgaaaatagacgtcagttggttatggaaagagaacttctaaaatttgtttttgataca
gcagtggctatcgatgatgaagttctgttgtcagttttagaaaaagatgccacaaatgcc
atgcaagatattacggcatccattcaaaaagaacagaacttaattatcagagatgaaaaa
aattccttaatgctcgtgaatggtgtggcgggaagtggtaaaacgtcggtcatcatgcag
cgaattgcttacttactttaccgaaatcgtcaagatatcaatgaagatgatgtgttgatt
ttgtcacctaatgaaggcttcattaaatatatctcagaagttttaccatctttaggagaa
aagaacccactgaacttaacgtttagaggcttattagaacagttaaccctaacggaaacc
gaaactgaagaaacgtatttcaatcgaattactcaactagatgtcagtgaacaaaccaaa
gttttacgtagtcaggcatttgttcagttcttaaaagagaaggggaatgatattttatct
tcatcagaactaccggtaagtggcattaatctaaaggatgaagttctaattaaagccgca
acgattcttgattactttaaaaatgcacctaaaacagtgtctttcttagatcaagttcaa
ggtgtgaagttgcacttagaaagtctttgggaagaaatattgaacaaagaatcattggaa
tcaaaaaatcaagaccagttacaattactatcggaacaagaacaacgccaattatttggg
aaattaattccagatacggaagagcaaattatgcgttttaccaaaaaaatgctgcgcaaa
aaatatcgttcaattcctgaaaaaattaaagaactagaatggttagatacgcaaaaatta
atggaaattttgtatgaatcatatacaggagtagcctatcaagaaggcgaagaaacagtg
gattcagaagttatctatttattaacgcaacacttatttgttgagaaattgtatgcgcca
agattaaaatttttatttattgatgaggtccaagactatacatctgctcaaatctgcttt
attaaagagttgtttccaaaagcaaaaatgaccatggtgggagatgaggaccaaggaatt
tttaattcagtgattgattttactcaaattgaagaaattcttgaaagttatcaaggagca
cctaaaacgtacaacttacaaaaaagttaccgttcaagtggtgcgattacccaaactttc
aataaactcagaggaaaaagacacgaggatattattccgattcaaccaataggagaagtt
ccaagctatgtttctctcaatgactttgaaaatctaaagaatttaattgagtcaaaagat
atcaaaaatacaagaatcatcacaaaaacaattgaagaaactcagcaattaaccgctgag
ttagacgaagattacttaagaggtcgcaagataaaagtgacacctattagtttagctaag
ggtctcgaatttgattatgtcctactttatgatgtatctagtcaaaattatcaaacagat
caggataaacgattgctttatacagctgtttcaagggcaatgaagacagtaatgattact
tatcaagatgaattagttgaatggttgaattaa
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