Vagococcus hydrophili: G7082_11315
Help
Entry
G7082_11315 CDS
T07081
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vhy
Vagococcus hydrophili
Pathway
vhy03410
Base excision repair
vhy03430
Mismatch repair
vhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G7082_11315 (recJ)
03430 Mismatch repair
G7082_11315 (recJ)
03440 Homologous recombination
G7082_11315 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhy03400
]
G7082_11315 (recJ)
DNA repair and recombination proteins [BR:
vhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G7082_11315 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G7082_11315 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G7082_11315 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Usp
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
QIL49034
UniProt:
A0A6G8AVE7
LinkDB
All DBs
Position
2305724..2308048
Genome browser
AA seq
774 aa
AA seq
DB search
MKESLYKWNVQAEEETSSVLIPELDRLKINQELAPLLWSRGITTPEQIETYFNPTVANFH
DPFLLYDMEKSVERIQQAIENGEKILVYGDYDADGITSTTVMKEAIELIGGNVCYYLPNR
FTDGYGPNVAVYKRMIEEEEIQLIVTVDNGVSGHEAIQYANTKGVDVIVTDHHELPEELP
EAFAIIHPRHPKGNYPFNDLAGVGVAFKVATALLGEIPMESLDLVAIGTIADLVSLTDEN
RAMVKIGLEIMKQSERIGLNALADVAKVDLTSASEETVGFTLAPRLNAIGRLGDASPGVE
LLSTFDDEEAANIATFIQQKNTERQTIVKDITAEALEMAREKTDDAILILVNETWHQGVL
GIVASRVVQELHKPTIVLNLDKETGLLKGSGRSVQGVDLFQVLSSVKDELESFGGHHMAA
GLTLKHEKLEDIKSQVNQKIIDLGMTSLDKEELLIDRVLELDSVNVEFIERLKLLSPFGT
DNPSPYFLIKSNKLKNIKQIGADNAHLKCQLSEKETTVDCLAFNRGQEIHEFEFADEIEI
VGQLSINEWNGFRKPQVMLTDFAISDWQIFDARGKKKQEINPQTDNVGYLVFEEKVFEKV
QSRNPHTYLIKDMNEALIERINSHEEVVIVDCPYDLENAKAIFSQLNVARVFLEANVLQE
HYLTGLPTREQFSKLFKLIAAQESIDIRNKIKDISMYLKIDKNLLIFMIQVFFDLGFVTI
DDGLMTKVQNPVNKPLPESKIYQDYQHKIEMEKLFLYSDIKEIKQWILQQEEFK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaatcactatataaatggaatgtacaagcagaggaagagacgtctagcgtactt
attcctgaattagacagattaaagattaatcaagagttagcaccacttttatggagcaga
gggattactacgccagaacaaatagaaacttatttcaatccaactgtggcaaatttccac
gatccttttttactttatgatatggaaaaaagtgtggagagaattcagcaagccatcgaa
aatggcgaaaaaatactggtttacggtgattatgatgctgatggtattacaagcactacc
gttatgaaagaagctattgagttgattggtggtaatgtctgttactacctacctaatcgt
tttacagatggttatggacctaatgtggctgtttataagagaatgattgaagaagaggaa
attcaacttattgtaactgttgataacggagtaagtgggcatgaagccattcaatacgct
aatacaaaaggtgtggatgtgattgttacagatcaccatgaattaccagaagaattacca
gaggcttttgctattattcatccgagacacccaaaaggaaactatcctttcaacgattta
gcaggggtcggtgtagcttttaaagtagcaaccgccctcttaggtgaaattccgatggag
agtctggatttagtggcgattgggacaattgctgatttagtttctttaaccgatgaaaat
agagccatggtaaaaattggtttagaaataatgaaacaaagcgaaagaattggattaaat
gctcttgctgacgttgcaaaagttgatttgacaagcgcctcagaggaaacggttggattt
actctagcccctagattaaatgctattggtcgtctaggagatgcttcacctggtgttgag
ttattatctacctttgatgatgaagaagcagccaatattgccacatttattcaacaaaaa
aatacggaacgtcaaaccattgtaaaagatattacagcagaagctcttgagatggctaga
gaaaaaacagatgatgctattttaattttagtgaatgaaacatggcatcaaggagtttta
ggaattgttgccagtcgagttgttcaagaattgcataaaccaacaattgttttgaattta
gacaaagagactggtcttttaaaagggtctggtcggagtgttcaaggagttgatttattt
caagtcttaagttcggtgaaggacgagttagaaagttttggtggtcatcatatggctgct
ggcttaaccttgaaacacgaaaaattagaagatataaaaagccaagtgaaccaaaaaatt
attgacttaggaatgacttctctagataaagaggaattactgattgaccgcgttcttgag
ttagattcagtcaatgtggaatttattgaacggttaaaattattatcaccatttgggaca
gataacccgtcaccttattttttaattaaatctaataagctaaaaaacattaaacaaatc
ggggcagataatgctcatttaaaatgccagttaagtgaaaaagaaacgacagtcgattgt
ctcgcttttaatcgtggtcaagaaattcatgaatttgaatttgcagatgagattgaaatc
gtagggcagttatcaattaacgaatggaatggttttagaaagcctcaagtgatgctgact
gatttcgctatttcagattggcaaatttttgatgcccgtggtaagaaaaaacaagaaatc
aatccacaaacagacaatgtgggctatcttgttttcgaggagaaagtgtttgagaaagtt
caatctagaaatccgcatacttacttaataaaagatatgaatgaagcgttaattgaaagg
attaattcacatgaggaagtagttattgtggattgtccttatgatttagaaaatgctaag
gctatttttagtcaactaaatgtcgcaagagtctttctagaagctaatgtattgcaagag
cattatttaaccggacttccaaccagagaacaattttcaaaactattcaaactaatcgca
gcacaagaatcaattgacatcagaaataaaattaaagacatttcaatgtatttaaaaatt
gataaaaatctattaatttttatgattcaggtgttttttgacttaggatttgttacaata
gatgatggtctaatgactaaagtccaaaatccagtgaataagcccttaccagaaagtaaa
atctatcaagattatcaacacaaaattgagatggaaaaattatttttatacagcgacatt
aaagaaattaaacagtggattttgcaacaggaggaattcaaatga
DBGET
integrated database retrieval system
