Vagococcus hydrophili: G7082_11770
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Entry
G7082_11770 CDS
T07081
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vhy
Vagococcus hydrophili
Pathway
vhy03420
Nucleotide excision repair
vhy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G7082_11770 (pcrA)
03430 Mismatch repair
G7082_11770 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhy03400
]
G7082_11770 (pcrA)
Enzymes [BR:
vhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7082_11770 (pcrA)
DNA repair and recombination proteins [BR:
vhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7082_11770 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
G7082_11770 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
ResIII
AAA_11
DUF2813
Motif
Other DBs
NCBI-ProteinID:
QIL49116
UniProt:
A0A6G8AVU0
LinkDB
All DBs
Position
2394934..2397183
Genome browser
AA seq
749 aa
AA seq
DB search
MSKKDSLIQGLNQKQKEAVMNINGPLLIMAGAGSGKTRVLTHRIAYIIHEKDINPWNILA
ITFTNKAAREMKERVVGILGSSGEDVWVSTFHSMCVRMLRRDVDAIGYNRNFTILDSSDQ
LTLMKRILKEENIDPKKYDPRSMIGAISNAKNELLTPELYAERYTGFFEKVVGTCYKRYQ
KELRQNQSMDFDDLIMLTIRLLKENPEILKFYQNKFQYIHVDEYQDTNHAQYTLVNMLAE
RFKNLCVVGDADQSIYGWRGADMQNILDFEKDYPDATTILLEQNYRSSKNILQAANSVID
KNDNRKKKALWTDNDEGEKIIYFRGETERDETQFIVSNVQKFINEQGKKYGDFCVLYRTN
AMSRVVEETFLKSNIPYKMVGGHKFYDRKEIRDILAYLNVISNEMDSLSFERVVNVPKRG
IGPGTVQKLRDFADIHAWSLLQAAIDVDLTGITGKARNELAGFGAMMEDFKNMIPFLSVT
ELVEQVLDKSDYREDLRRQNTLEAHSRLENLEEFLSVTKEFDKRFEAGEYDNGEDEGELP
NKLTLFLNDLALVSDLDNLEEGQTQVTFMTLHAAKGLEFPVVFLMGMEEGVFPLSRALLE
NDELEEERRLAYVGITRAEEQLFLTNAFSRTLYGRTQYNRPSRFLGEIDDKVMESFGREN
KVVRQTPIGERKTRSSYIQPENAKVSSKVQTGGEASAWKPGDKAEHKKWGVGTVVKVSGS
SKDLELDIAFPQQGIKRLLAAFAPITKVN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaagatagcctcatccaaggcttaaatcaaaaacaaaaagaagcggttatg
aatattaatggaccacttttaattatggctggggcaggtagtgggaaaacacgtgtttta
actcatcgaattgcgtacattatccatgaaaaagatattaatccatggaatattttagcc
attacctttacgaataaagcagctcgagaaatgaaagagcgtgttgttggtattttaggt
tctagtggagaagatgtttgggtttcaacatttcactcgatgtgtgttcgcatgttacgt
cgtgatgtggatgctattggttataatcggaacttcacgattttagatagtagtgatcaa
ttgactttaatgaagcgaattttaaaggaagaaaacattgatcctaaaaaatatgatcct
cgcagtatgattggtgcgattagtaatgcgaaaaatgaacttttaacacctgaattgtat
gcagaaagatacacaggtttctttgaaaaggttgttgggacctgctataaacgatatcaa
aaagaactaagacaaaaccagtcaatggattttgatgatttgattatgctgacgattcgt
ttattaaaagaaaaccctgaaattttaaaattttatcaaaataaattccagtatattcat
gtggacgagtatcaagatacgaaccacgcgcaatatacgttagttaatatgcttgctgaa
agattcaaaaatttatgtgttgttggggatgcagaccaaagtatttacggttggcgcggg
gctgacatgcaaaatattttagactttgaaaaagattacccagatgcaacaacgattctc
ttagaacaaaattatcgttctagtaaaaatatcttacaagcagcaaacagtgtcattgat
aaaaatgacaatcgtaagaagaaagcactttggacggataatgatgaaggagaaaagatc
atttatttccgcggagaaacagaacgtgatgaaacccagtttatcgtttctaatgtccaa
aaattcatcaatgaacaagggaaaaaatatggcgatttctgtgtcctttaccgaacaaat
gcgatgagtcgtgtggttgaggaaacattcttaaaatcaaatattccttataaaatggtt
ggtggacataaattctacgaccgtaaggaaattcgtgatattttagcttacttaaatgtc
atttctaatgaaatggattcattaagttttgagcgtgtggtgaatgtgccaaaacgtggg
attgggcctggtacagttcagaaattacgtgattttgcagatattcatgcttggtcactt
cttcaagcagccattgacgttgatttaactggtattacaggtaaagctcgtaatgaatta
gctggctttggtgccatgatggaagatttcaaaaacatgattccatttttaagtgtgact
gaattagtggaacaagttctagataaaagtgattaccgtgaagacttacgccgtcaaaat
acattagaagctcattctcgattagaaaacttagaagaatttctatcagtaacgaaagaa
tttgacaaacgttttgaagctggtgagtatgataatggagaagatgagggtgaattacca
aataaactcacacttttcttaaatgacttagctctagtttcagatttagataatttagaa
gaaggccaaactcaagttactttcatgacccttcatgcggcaaaaggattagaattccca
gtggttttcttaatgggaatggaagaaggcgtcttcccactttctagagcgctacttgaa
aatgatgagctagaagaagaacgtcggttagcttatgtggggattacacgagcggaagag
caactgtttttaaccaatgcatttagtcgaacactttacggacgtactcaatataatcgt
ccatctcgtttcttaggtgaaattgatgataaagtcatggaatcatttggacgtgaaaat
aaagtcgttagacaaacgccaattggtgaaagaaaaacacgttcaagttatattcaaccg
gaaaatgctaaagtatcaagtaaagttcaaactggtggagaggcgagcgcttggaaacct
ggcgacaaagctgagcataaaaaatggggcgttggaacagtcgttaaagtgagcggatca
agtaaagatttagagttagatattgcttttccccaacaaggaattaaacgcttattagca
gccttcgccccaataacaaaagtaaactaa
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