Vagococcus hydrophili: G7082_12635
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Entry
G7082_12635 CDS
T07081
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vhy
Vagococcus hydrophili
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vhy03032
]
G7082_12635 (topA)
03400 DNA repair and recombination proteins [BR:
vhy03400
]
G7082_12635 (topA)
Enzymes [BR:
vhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G7082_12635 (topA)
DNA replication proteins [BR:
vhy03032
]
Prokaryotic type
DNA Topoisomerases
G7082_12635 (topA)
DNA repair and recombination proteins [BR:
vhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G7082_12635 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF7078
Zn_ribbon_RPB9
Toprim_2
PI_PP_I
Motif
Other DBs
NCBI-ProteinID:
QIL49275
UniProt:
A0A6G8AWE9
LinkDB
All DBs
Position
complement(2577608..2579689)
Genome browser
AA seq
693 aa
AA seq
DB search
MSYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDIEDNYDPKYINIRG
KGPVIKELKKYAKKADKVYLAADPDREGEAIAWHLAHILDLDLEDNNRVVFNEITKDAVK
AAFKEPRKINVDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSIALKMIIDRE
DEIRAFTPEEYWSITGDFVKGKSKFKANFYGIDGKKLKLNNADEVKAITEKLTSRDYDVT
KVTKKERKRNPSLPFTTSGMQQEAARKLNFRTRKTMMVAQQLYEGIKLGKGQGTVGLITY
MRTDSTRLSDTAKEEAFNFIVEKYGKDYTGGAIKKTKNAKGAQDAHEAIRPSSILRTPES
VKEFLDKDQFKLYSLIWARTVASQMAPAILDTMRVDIEQNGIKFVANGSKIKFAGFTKVY
IEGKDDGKEDKENILPELAEGDAVKSADIEPKQHFTQPPARFSEATLIKTLEENGVGRPS
TYAPTLETIQRRYYVKLNARRFEPTELGEIVNKLVCEFFSKIVDVNFTAEMEKDLDKIAI
AQENWVDVVDKFYKPFAKELEVAEKEIEKVQLKDEPAGFDCEECGNPMLIKLGKYGKFYA
CSNFPDCRNTKAIVKKIGVTCPTCKKGDVIEKKTKKNRIFFGCDQYPECEFTSWDRPIGR
DCPKCSHYLILKKVRGGQQIICSDCDYTEDVQK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaatatttagtaatcgtagaatccccagcaaaagctaaaaccattgaaaag
tacttaggcagaaattataaagttgtagcgagtgtgggtcatattcgagatcttcctaaa
agtaaaatgggtatagatattgaagataactatgatccaaaatatattaatatcagggga
aaaggtcccgttatcaaagaattaaaaaaatatgcgaaaaaggcggataaagtttacctc
gcagccgatccggatagggaaggggaagccatcgcatggcacctcgcccacattttagat
ttggatttagaagataacaaccgagttgtctttaatgagattacaaaagatgctgttaaa
gcagcgtttaaagaaccacgtaaaattaacgttgatttagtggatgcccaacaagctcgt
cggattttagaccgcttggtaggttattcaattagtccgttattatggaagaaagtaaaa
aaaggattgagtgccggtcgggttcaatcgattgctttaaaaatgattattgaccgtgaa
gatgagattcgtgcgtttactccagaagaatattggagtattacaggtgattttgtcaaa
gggaaatcaaaattcaaagctaatttttacgggattgacggtaaaaaattaaaattaaat
aatgcagatgaagtaaaagctatcacagaaaaattaacttctcgcgattacgatgtgacg
aaagtaacgaaaaaagaacgtaaaagaaacccatcactaccctttacaaccagtggcatg
caacaagaagctgctcgtaaattaaacttcagaacaagaaaaaccatgatggtggcacaa
caattgtatgagggaattaagcttggtaaaggtcaaggaacagtcggtttaattacctat
atgcgtactgattcaactcgtctttctgatacggctaaagaagaagcttttaactttatc
gttgagaaatacggaaaagactatactggtggtgctattaagaaaactaaaaatgctaag
ggtgctcaagatgcccatgaggcgattcgtccatcaagtattttaagaacaccagaatca
gtcaaagaattcttggataaagatcaatttaaattgtattcattaatttgggcaagaaca
gtcgcaagtcaaatggcaccagctattttagatacaatgcgtgttgatatcgaacaaaat
ggcattaaatttgttgccaatggctcaaaaatcaagtttgctggattcacgaaagtctat
attgaaggcaaagatgatggtaaagaagataaagaaaatatcttaccagaacttgctgag
ggagatgcggttaaatcagccgatattgagccaaaacaacatttcactcaaccaccagca
agatttagtgaagcaaccttgattaaaaccttagaagaaaacggtgtaggtcgcccatct
acgtatgcgccgacccttgaaaccattcaaagacgttactacgtgaaattaaacgcgcgt
cgttttgagccaactgagcttggtgaaattgttaataaattagtttgtgagttcttctcg
aaaattgtggatgtgaactttacggctgagatggaaaaagatttagataagatagccatt
gctcaagaaaattgggtggacgtcgttgataaattctataaaccatttgctaaagagtta
gaagtcgctgaaaaagaaatagaaaaagttcaattaaaagatgaaccagcaggctttgac
tgcgaagaatgtggcaatccaatgctcattaaattaggtaaatatggtaaattctatgcc
tgtagtaattttcctgattgtcgtaacacgaaagccatcgttaaaaaaatcggtgtgaca
tgtccaacttgtaaaaaaggagatgttatcgagaagaaaacgaagaaaaatcgtatcttc
tttggctgtgatcagtatcctgaatgtgaatttacttcttgggatcgcccaattggtcgt
gattgtccaaaatgttctcattacctaatacttaaaaaagtacgtggtggtcaacaaatt
atttgtagcgactgtgattatacagaagatgtgcaaaaataa
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